Pangasianodon hypophthalmus (striped catfish): 113545921
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Entry
113545921 CDS
T05759
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113545921 (gabra5)
04082 Neuroactive ligand signaling
113545921 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113545921 (gabra5)
Ion channels [BR:
phyp04040
]
Ligand-gated channels
GABA-A
113545921 (gabra5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
113545921
NCBI-ProteinID:
XP_026801390
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MVCDPHRSRNRSSSSSSSATMRGSVCFTAVFLSFTCHVSLSQATTATPNEAELNDNITVF
TRILDGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERL
RFKGPMGMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLQDDGTLLYTMRLTI
SAECPMQLEDFPMDAHACPLKFGSYAYPISEVVYKWTQGPTKSVVVAEDGSRLNQYHLIG
QTAGTEDINTSRGLYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPAR
TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSW
AWDGKKAMEAQQPKKKKDPLALSKKPNNTCSTGMNFTANITKDSAIATISNSTTVQMKSS
ESKSTPDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAVSPT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtctgtgacccacaccgcagcagaaacagaagcagcagcagcagcagcagcgctacc
atgagaggaagcgtgtgcttcaccgccgtcttcctcagcttcacatgccatgttagcctc
tcacaggccaccaccgcaaccccgaatgaagcagagttgaacgacaacatcacagttttc
actcggatcctggacggactgctggatggctacgacaacagactgcgtcccggcctggga
gaaaaggtgactgagatcaagaccaacatctttgtcaccagttttggtcccgtgtctgat
actgagatggagtacacaatcgatgtgtttttccgccaaagttggaaggatgagcgcttg
cgcttcaaaggtcccatggggatgctgcctctgaataacctgctggccagcaacatctgg
actccagacaccttcttcctgaacggcaagaaatccatcgcgcacaacatgaccacgccg
aacaagctgctgaggctgcaggatgacggcacgctgctctacaccatgagactgaccata
tcagccgagtgtccgatgcagctggaggatttccccatggacgctcacgcctgtcctctc
aagttcggcagctatgcctacccgatctcagaggtagtgtacaagtggacccaaggccca
acaaagtctgtggtggtggcggaggatggttcacgactcaaccagtaccatctgattggc
cagacagccggcactgaggacatcaacaccagcagaggcctctacacagtgatgatggct
cacttctacctgaagagaaagatcggatacttcgtcatccagacctacatgccgtgcttc
atgacggtcattctgtcgcaggtctccttctggctgaatcgggagtccgtccctgcgagg
acggtgtttggagtgactacagtgttgaccatgaccacgctgagcatcagcgcccgaaac
tcgctgcccaaagtggcctacgctacagccatggactggttcatcgccgtgtgttacgcc
ttcgtcttctccgccctcatcgagttcgctaccgtcaactacttcaccaaacgcagctgg
gcgtgggacggcaagaaagccatggaggcgcaacagcccaaaaaaaaaaaagacccgctg
gcgctgtccaagaaacccaacaacacgtgctccaccggcatgaacttcacggccaacatc
accaaagactccgccatcgccaccatctccaacagcaccaccgtgcagatgaagagctcc
gagagcaagtccacgccagaccccaagaaaacgtacaacagcgtcagcaagatcgacaag
atgtcccggatagtgttccccgtcctcttcggtaccttcaacctggtctactgggccacg
tacctcaacagggaaccggtgattaaaggagcagtttcgcctacatag
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