Pangasianodon hypophthalmus (striped catfish): 113545939
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Entry
113545939 CDS
T05759
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145
Phagosome
phyp04540
Gap junction
phyp04814
Motor proteins
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113545939 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
113545939 (tubb1)
09142 Cell motility
04814 Motor proteins
113545939 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113545939 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113545939 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113545939 (tubb1)
04147 Exosome [BR:
phyp04147
]
113545939 (tubb1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
113545939 (tubb1)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
113545939 (tubb1)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113545939 (tubb1)
Exosomal proteins of colorectal cancer cells
113545939 (tubb1)
Exosomal proteins of bladder cancer cells
113545939 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
113545939
NCBI-ProteinID:
XP_026801423
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MREIVHLQIGQCGNQISSKFWEVISDEHGISALGTYEGDMDVQLERASVYFNEANGGKYV
PRAVLVDLEPGTIDSVRGSHIGGLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRV
RNEAESCDCLQGFQFVHSLGGGTGSGMGTLLINKIREEFPDRIMNSFSVMPSPKVSDTVV
EPYNATLSVHQLIENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLIPRGSHQYQALSVPELTQQMFDARNMM
TACDPRHGRYLTVAGVFRGRMSTKEVDEQMLAVQQKNSNYFVEWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFAMMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATAELEWEPEEEITEVEENPATVINTSVDIKTETMSDA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagattgttcatcttcagatcggacagtgtggtaatcagatcagttcaaagttc
tgggaagttatcagtgacgaacatggtatcagtgcattgggaacctatgagggggacatg
gacgttcagctggagagggccagtgtctactttaatgaagcaaatggtgggaagtatgtc
ccccgggcagtgctggtggatttggaaccaggaacaatagacagtgtgaggggaagtcac
attggaggactcttcagacctgacaacttcatacatggaaattctggagctggaaataac
tgggcaaaaggtcactacacagagggggcagagttggtcgagcaagtagtagaccgtgtc
cgtaacgaagctgaaagttgcgactgcctgcagggcttccagtttgttcactctttgggt
ggtggtaccggctcaggcatgggcaccctcctcatcaacaaaattcgtgaagagttccca
gaccgaatcatgaatagctttagtgtcatgccctctcctaaagtctctgacacggtagtg
gagccatataatgccacactgtccgttcaccaactgattgagaatacagatgagacattc
tgcattgacaacgaagctctttatgatatctgtttccgtacactcaagctcaccacgcca
acatatggagatctcaatcatcttgtgtctatgactatgagtggggtcacaacctctctg
cgcttccctggtcagctgaatgctgaccttcgcaagctggctgtcaatatggtgcccttt
ccccgccttcacttctttatgcctggctttgctccgctcataccacgaggaagtcatcaa
taccaggccctctctgttcctgaactcacccagcaaatgtttgatgcccggaacatgatg
acagcatgtgacccccggcatggccgctaccttactgttgcaggagtttttcgtggtcgt
atgtccactaaagaggtggatgaacaaatgcttgcggttcagcagaagaacagcaactac
tttgtggaatggatcccccacaacgttaaagtggctgtttgtgacatcccaccacgcggc
cttaaaatggcatctaccttcattggaaacaacacagccatccaagagattttccggcga
gttggggagcagtttgccatgatgttccgtcgcaaggcttttctgcactggtacacagga
gagggcatggatgagatggagttcacagaggctgagagcaacctgaatgatctagtatct
gagtaccagcaatatcaggatgccacagctgagttggagtgggagccagaggaagaaatt
acagaggtagaggaaaatccggcaacagtaataaacaccagcgtcgacataaaaactgaa
accatgagtgatgcttag
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integrated database retrieval system
