Pangasianodon hypophthalmus (striped catfish): 113545970
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Entry
113545970 CDS
T05759
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113545970
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113545970
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113545970
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113545970
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113545970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
113545970
NCBI-ProteinID:
XP_026801458
LinkDB
All DBs
Position
Unknown
AA seq
2566 aa
AA seq
DB search
MTATTRGSPMGNSDNQGQSQPPDGQSQAPDGQSQAPLPQNQTPSPNSSNETSPVSPLEGQ
GQGQGDAQQAQEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGL
DVKCEACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVVKLSQDWFP
LLELLAMATNPHCKFHIYNGTRPSESVPAGPQLADDELFARPPDPRSPKGWLVDLINKFG
TLGGFQILHDRFMSGQTLNVQIIAALIKPFGQCYEFLTLHTVKKFFLPVIEMVPQFLENL
TDEELKKEAKNEAKNDALSMIIKSLKNLASRLPGQEETVKNLEIFRLKMILRLLQISSFN
GKMNALNEVNKVISSVSYYTHRHGNPEDEEWLTAERMAEWIQQNNILSIVLRDSLHQPQY
VEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDYLF
DCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQAL
SAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQ
TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHQGFDPQTVRVGSRYS
HVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEP
DLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELI
GLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDT
LCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLV
VRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIVDPADDRKL
IGQLNLKDKTLITAKLTQVSSHMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGV
IMSLHLRYISFLWQVADLGCTLNMPLLRDGARVLMKLIPPDNTTVENLRAICLDHAKLGE
NSLSPTLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGDDASDFQYNFLKSGGLPLVLGM
LTRNNFLPNTNMETRRGAYLNALKIGKLLLTAIGFGHVKAVAEACQPVVEGTNPTSPINQ
ATHDQALVLQNALQSIPNPASECMLRNVAIRLAQQIFDENFFQASKYIPDISVIRAVQKI
VWASGCGSIQLVFSSNEEISKIYEKTNAGNEPDMEDEQVCCEALETMTLCFALMPTALDT
LSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTA
KERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIKDEVKGTGETGVEET
ILEGHLGVTKELLAFQTPEKKFYIGCEKGGANLIKELIDDFIFPASNVFLQYVKTGEFPA
EQAIPVCSSPASINAGFELLVALAVGCVRNLKQIVDTLTEMYYQGCEALTEWEYLPPVGP
RPTKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGAGSDVDDDMSGDEKQDSESN
VDPRDEVFNYHQQFDDKPSLNKAEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQ
FRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPSMLSRVLGGSFADQKICQGCPHR
YECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLP
PVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLESSEVSSESQVTHQN
APLEPELGGSSRYRLVGVLVHSGQASGGHYYSYIVQRHSNSADGQRDRWYKFDDGDVTEC
KMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDAVSVDGDLLKH
IAEMTLVPKPQHLKMPSAIECGVRKQNVQFMHSRMQYSLEYFQFVKKLLTCNSVYLNPPP
GQDYLLPEAEEIAMISIQLAARFLFTTGFHTKKVVRGPASDWYDALCILLRHSKNVRSWL
AHNVLFAFPSRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPAPVTSPGSSTQACD
NMTLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLSVPATFMLV
ALDEGPGPPIKYQYAELGKLYTVVSQLLRCCDVSSRMQSSINGNPALPNPYGDSNLTAPI
MPLQQHVAEILFVRASYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYS
YTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCI
KCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYSYNNWSPPVQS
NETSNGYFLERSHSARMTLAKACELCPEEEPDDQEAPDDHESSPPEDTALYPHSPGAQYQ
QPNNHTHGQPYTGPAAQHMNNPQRAPQRPQDSWEGTDEALPAQTKE
NT seq
7701 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacccggggctcccccatggggaacagtgacaaccagggacaaagccaa
cccccggatggccagagccaagccccggatggccagagtcaagcccctctaccccagaac
cagacaccttctcccaactcttctaatgagacatctccagtgagccctctggagggacag
ggacaggggcagggtgatgctcagcaggcacaggaagaggaggagccagcattcccccac
acagacctggccaagctggacgatatgatcaaccggcctcgctgggtggttccagtcttg
ccaaagggggagctagaagttctacttgaagctgctatagatctaagtaaaaaggggctc
gatgtgaagtgtgaggcatgtcagaggttttttcgagatggcctgacaatctcattcaca
aaaattctgacagatgaagcagtgagtggttggaagtttgaaattcatagatgtatcatc
aataacacacatcggctggtggagctatgtgtggtcaagctgtctcaagattggtttcca
ttgcttgagctcctagccatggcaaccaacccccactgcaagtttcacatctacaatgga
acacgcccatctgagagtgtacctgctggtccccagctcgctgatgatgagctcttcgca
cgcccaccagaccctcgttcacctaaaggctggctggtggaccttataaataaatttggc
acacttggggggttccagatccttcatgatcgtttcatgagcggtcagactcttaatgtg
cagattattgcagctctcataaagccatttgggcagtgttatgagtttttgacattgcac
acagtgaagaagttcttcttgcctgtgatagaaatggttccacagtttctggagaatctc
acagatgaagaacttaagaaggaagccaagaatgaggccaaaaatgatgctctttctatg
ataatcaagtccttgaagaacctggcatcgcgattaccaggccaagaagaaacggtcaag
aacttagaaatctttaggttaaaaatgatccttaggttattgcaaatttcttcttttaat
ggaaaaatgaatgcactaaatgaagtgaacaaggtgatctcaagtgtttcatattacacc
catcgccatggcaacccagaggatgaggagtggctcactgctgaacggatggcggaatgg
attcagcagaataacattctgtctattgttctgagggacagcctgcaccagcctcagtat
gtggagaaactagagaagatattgcgctttgtaataaaagaaaaagcacttactttacag
gacctggacaacatctgggctgcacaggctggtaagcatgaggccattgtgaagaatgtc
catgacctgttggctaagttggcctgggatttctcaccagagcagcttgactacctgttt
gactgcttcaaggcaagctggacgaatgcaagtaagaagcagagggagaagctgctggag
ttgatccgccgcctggcagaggacgacaaggatggtgtgatggctcacaaggtgcttaac
ctgctgtggaacctggcacacagtgacgatgtccctgtcgacattatggatcaggcccta
agtgcccatattaagattttggactacagttgttcccaggatcgggacacgcagaagatt
cagtggatagaccgtttcattgaagaactgcgaaccaatgataagtgggtgatcccagca
ttaaaacagatccgagagatctgcagcctgtttggagaggcccctcagaatctcagccag
acgcagcggagtcctcatgtgttctaccgacatgacttgatcaaccagctgcagcacaac
catgcactggtcacactggtggcagagaacctgtctgcttacatggagaacatgcgacaa
ttctctaaagagcatcaaggttttgaccctcagacagttcgcgtgggcagccgctacagc
catgtgcaagaagtccaggagagactcaacttcctgagattcctgttgaaagatgggcag
ttatggctgtgcgctcctcaagctaagcagatttggaagtgcctggcagagaatgcagtc
ttcctctgtgaccgcgaggcttgtttcaaatggtactccaaactcatgggtgatgagcct
gaccttgacccagacatcaacaaggacttctttgagaacaacgtgctgcagctggatccc
tcactgctgacagaaaatgggatgaagtgctttgagcgcttctttaaagcagtgaattgc
agggagggcaagctagtagccaagcgcagggcatacatgatggatgatctggagctcata
ggccttgactacctctggagggttgtgattcaaggaagtgatgacattgccagtcgggca
atagatctgctgaaagagatttacacaaaccttggaccaaaattacaagtaaatcaggta
gagatccatgaagacttcatccagtcttgtttcgaccgcctgaaggcctcatatgacaca
ctttgcgtgctggacggggataaggacagcataaattgtgctcgacaggaggccattcgt
atggtcagagtgttgactgtgcttaaagagtatattaacgagtgtgacagtgactaccat
gaggagagaaccattcttcccatgtcccgggcgtttcgtggaaagcacattaccctggtg
gtgcgatttcctaaccaaggtcggcaggtggatgacctggacatctggtctcatactaat
gacaccattggctcagtacgccgctgcatcctgaaccgcatcaaagccaacagtacacat
accaaaatcgagctttttattggaggagagattgtggacccggctgatgaccgcaagcta
atcggacagctcaatcttaaagacaaaactctgatcactgcaaagttgacccaagtcagc
tcccacatgccctccagtcctgacagctcttctgactcgtccacgggctcacctgggaac
catggcaaccactacagtgatgggcccaacccagaggtggagagctgcctgccaggagtg
atcatgtcgctgcacctacggtatatctcattcctgtggcaagttgctgatttgggctgc
actttaaacatgcctttactgcgggatggagccagggtccttatgaagctcatacctcca
gacaacactacagtggagaacctgcgtgcaatctgtctggatcacgctaagctgggagag
aacagcctcagtcccaccttagattctcgcttctttggcccttcaccttcacaagttctc
tatcttactgaggttgtctatgcccttcttatgccagccagtggcactctgggagacgat
gccagtgatttccagtacaacttccttaaaagtggtggtctcccattggtactggggatg
ctcaccaggaataacttccttcccaacaccaacatggagacgcgtcgtggtgcctactta
aatgctctgaaaattggcaagcttctgctcactgccattgggttcggccatgttaaagca
gtggcagaggcctgccagcctgtggtggagggcaccaaccctacatcgccaataaatcag
gcaactcatgaccaggccttggtgcttcagaatgctctccagagcatccctaaccctgcc
tcagaatgcatgttgcgcaatgtagctatccgactggcccagcagatctttgatgagaat
ttcttccaggcatcaaagtacatcccagacatcagtgtgatacgagcagtgcagaaaatt
gtgtgggcttcaggctgtggaagcattcagctagtcttcagctccaatgaggagatcagt
aagatatatgagaagactaatgcaggtaatgagccagatatggaggatgagcaggtgtgc
tgcgaggctctggagaccatgacactctgttttgctctcatgccaacggccctggataca
ctcagtaaagagaaggcttggcagaccttcatcatcgacctgctattgcactgccagagc
aagtcggtgcgtcagatggctcaggagcagtttttcctcatggccaccagatgttgtatg
ggccaccgacctctccttttcttcatcaccctcctcttcacagttctgggaagcactgca
aaggaaagggcaaagcatgccggtgattacttcaccctcttaaggcacttacttaactat
gcatacaacagcaacatcaacctgcctaatgcagaagtactgcttaacaacgaaatcgac
tggttgaaaagaatcaaggatgaagtaaagggaacaggggagaccggggtggaagagacc
attcttgaaggtcacctgggagtcaccaaggagcttttagcattccagaccccggagaaa
aaattctatattggctgtgaaaagggtggagccaaccttattaaggagctcatagatgat
ttcatcttcccagcatctaacgtgttcctacagtatgtcaagactggagagttccctgcc
gagcaggcgatcccagtgtgcagcagtcctgcctccatcaatgctggctttgagctgctc
gtggcccttgccgtgggatgcgtccgcaaccttaagcagattgttgacactctcacagaa
atgtactaccaaggctgtgaggctcttacagagtgggaatatctcccacctgtgggaccg
cgacccactaaaggttttgtaggtctgaagaatgccggagccacatgctacatgaactct
gtgatccagcagttgtacatgattccctccatccgaaatggcattctggccatagagggt
gctggcagtgatgtggatgacgatatgtctggagatgaaaaacaggacagcgagagtaat
gtggaccccagggatgaagtgttcaattatcatcagcaatttgatgacaagccctctctc
aataaggctgaggatcgcaaggagtacaatatcggagtgctgcgccacctgcaagtcata
tttggccaccttgctgcatcccggctacagtactatgtacctagagggttctggaaacag
ttcaggctatggggggagccagtcaatctgcgggaacagcacgatgctctggagtttttt
aactctctggtagacagcctggatgaagcactgaaggcccttgggcatcccagcatgctc
agcagagtcctgggtggctcatttgcagatcagaaaatctgccagggctgtccccacaga
tacgagtgtgaggaatccttcacaacactgaacgtagacatcagaaaccatcaaaacctc
ctagattccttggagcagtatgtcaaaggggacctgctggaaggggccaacgcttatcac
tgtgagaagtgcaacaagaaggttgataccgtgaagcgcctcctgattaagaagcttcct
ccagtactggccattcagctcaagcgttttgactatgattgggagcgtgagtgtgccata
aagtttaatgattactttgagttcccacgtgagttagacatggagccatacactgtggca
ggagtggccaagctggagagcagcgaggtttcttcagagagccaagtcacccaccagaat
gcacccttagagccagagttgggtggaagctcgcgttaccggttagtaggagtgctggtg
cactcagggcaggccagcggtggccattattactcctacattgtccaacgtcacagcaac
agtgctgatggccagcgagatcgctggtacaaattcgatgatggtgacgtcactgagtgc
aagatggatgatgacgaggaaatgaagaaccagtgctttggtggcgagtacatgggtgag
gtatttgaccacatgatgaagcgcatgtcataccggcgccagaagcgctggtggaacgcc
tacatcctgttctatgagcgcatggatgcagtcagcgttgatggcgacctgttgaaacac
atagcggagatgacgctggtgccaaagcctcagcatctcaagatgccctcggccatcgag
tgtggtgtgcgcaaacagaacgtgcagttcatgcacagccgcatgcagtacagccttgag
tacttccagtttgtcaaaaagctgctcacctgcaatagcgtctacctgaacccaccccca
ggtcaagattacctgctacctgaagctgaagaaatagctatgataagtattcagcttgct
gctagattcctgttcactacaggattccataccaaaaaagtagtcagaggtcctgctagt
gactggtatgatgccctgtgcatactactgcgtcacagtaagaacgtccgcagctggtta
gcgcacaacgtcttgtttgcattcccctcgcgcttctccgaatatctgctggagtgcccg
agtgctgaggttcgtggagccttctccaagctcatagtcttcattgcacacttctcactg
caggatggcccatgccctgccccagtcacttcaccaggctcctccacacaggcctgtgac
aacatgacactgagtgatcacctcttgcgggctgtgcttaacctgctgaggagggaggtg
tctgagcatggccgacatcttcagcagtacttcaacctttttgtcatgtatgccaatctc
ggtttagcagaaaagacacagctgctgaagttgagtgtgccagctactttcatgctggtg
gctttggatgagggtcctggtccccctattaagtaccagtatgcagagctggggaagctt
tatacagtagtgtctcagctgctgagatgttgtgatgtatcatcacgtatgcagtcctca
attaacggtaatccagctctaccaaacccatatggcgactccaatcttacagctcccatc
atgcctctgcagcaacatgtggcagagatattgtttgtgcgtgccagctatgtgaagaaa
ataattgaggattgcagtaactctgaggagacggttaaactgctgcgattctgctgctgg
gagaaccctcagttctcatccactgtgctcagcgagcttctctggcaggtggcatactcc
tatacttacgagctgaggccttatctggacctgctactccagatcctgttgattgaagac
tcatggcagacacacagaatccacaacgtgctaaaggggatccccgatgaccgggatggg
ttgtttgataccatccagcgttcgaaaaatcactaccagaagcgggcttatcagtgcatt
aagtgcatggtagctctcttcagcaattgctctgtggcataccagatcctacagagtaat
ggcgacttgaaaaggaaatggacatgggcagtggagtggttgggcgatgagctggagagg
aggccatacacaggaaacccacaatacagttacaacaactggtctcctccagtgcagagt
aatgaaacctctaacggctacttcctggaacgatcacacagtgccagaatgacgctggcc
aaagcgtgtgagctctgtcctgaggaggagcctgatgatcaggaagctcccgatgaccat
gaatcctcccctccagaggacacagcactctaccctcactcgcccggggcacagtatcag
cagccgaacaaccacacccacgggcagccatacacgggtccggctgcccagcacatgaac
aaccctcagcgcgccccccagaggcctcaggacagctgggaaggcacggacgaggcgctc
cctgcccagacaaaagagtag
DBGET
integrated database retrieval system
