Pangasianodon hypophthalmus (striped catfish): 113546014
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Entry
113546014 CDS
T05759
Symbol
polr1c
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03020
RNA polymerase
phyp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113546014 (polr1c)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
113546014 (polr1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113546014 (polr1c)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113546014 (polr1c)
RNA polymerase I system
RNA polymerase I
113546014 (polr1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
113546014
NCBI-ProteinID:
XP_026801513
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MAVPMSNVDEIRDRVILGEFGVRNVHSTNFPGNYPGYDDSWDLKKFKKNFRLDVVHMDEN
TLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVFIYNNTSIIQDEILAHRLGLVPIKADP
RLFEYRNAGDEEGTEIDTIQLQLKIKCTRNPRASKDASDPKELYLNHMVYSRDMKWEPIG
NQADVFADANIGPVHGDILLAQLRPGQELDIVMHCVKGIGKDHAKFSPVATASYRLLPEI
TLLQTIEGEKAERLKRCFSPGVIELEDVDGKQVAKVVNSRLDTCSREVLRHDDLKNLVKL
GRVRDHFIFSVESTGILPPDVLVSEAINVLIAKCQKFLTELDSVTEME
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcctatgagcaacgtggatgagatccgtgacagagtgattttgggcgaattt
ggcgtaagaaatgttcattctacaaattttcctggtaattatcctggttatgatgactca
tgggacctcaagaagttcaaaaagaatttcaggctcgatgttgttcatatggatgagaac
acgctggagtttgatatggtgggaatagacgctgccattgccaacgctttcaggcggata
ttactagctgaggtcccaactatggctgttgaaaaggttttcatttacaacaatacatct
ataattcaagatgagatcctagcacataggcttggcttggtacccatcaaagctgatcct
cgtctttttgagtacagaaatgctggtgatgaggaaggcacagaaattgacacaattcag
cttcagttgaagatcaaatgcacaaggaatcccagggcatctaaagatgcctctgacccc
aaggaactctacctcaatcacatggtgtattcaagggacatgaagtgggaacctattgga
aatcaggctgatgtgtttgctgatgctaacattggtcctgtgcatggagacatcctcttg
gcacagcttcggccaggacaagagctggatatagttatgcactgcgttaaaggaataggt
aaggaccatgcaaagttttccccagtggccactgctagttataggctacttcctgagatc
acattactgcagaccattgaaggagaaaaagctgagagattaaagcgctgcttctcacct
ggagttattgaattggaggatgttgatggaaagcaagtggctaaggtggtcaacagtcgt
ctggatacgtgcagcagagaagtgcttaggcatgacgacctaaagaacttggtcaaactt
ggaagagtgcgggaccatttcatattctcagtggagtctactggaattttaccacctgat
gtcttggtcagtgaggcaattaatgtactcattgcaaagtgccagaaatttctgactgag
cttgactcagtgactgaaatggaatag
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