Pangasianodon hypophthalmus (striped catfish): 113546038
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Entry
113546038 CDS
T05759
Name
(RefSeq) nuclear receptor corepressor 2-like
KO
K06065
nuclear receptor co-repressor 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113546038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113546038
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
113546038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
GPS2_interact
DnaT
Motif
Other DBs
NCBI-GeneID:
113546038
NCBI-ProteinID:
XP_026801537
LinkDB
All DBs
Position
Unknown
AA seq
2067 aa
AA seq
DB search
MSSHPQPVPQSRRAVDARHLPSSASLPLPIARAHTRAEELRLFSSPYTRVHSLRMLLDVS
SVKSSPLITHYFYTLFFFLFRGTEPHVRYEHIYLPEANSQSEVEYGEIKRPRLEIGAEPL
MRHPPQRPPLPLTGAEDVVKVSDLKRKKSENANEPNEEEKYIASKLALAALQRSGCRFIF
RSLMNKPEATAALEKKQTLKAARPLQGDSAEEQQQLEEEAAKPQEPERNISPPPSEAKHR
SLVQIIYDENRKKAEEAHRILEGLGPRVELPLYNQPSDTKQYHENIKINQVMRKKLILYF
KRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQR
ELQERMQNRVGQRGGLASAARSEHEVSEIIDGISEQEQQQQQQQVNRNNQEEKEDKEAEK
EGERDEDKNDADDKEDGIKDDTSGEDGEDKDPPVAIKGRRTANSRGHRKGRITRSMANEQ
EESSSPPLSGELGQYSHINTRTRISTHTFPLLSLSLAGCRKKLPLPVTHFCGDQVRLSHD
ETLKGREEDERTSGLLQYGRNWSSIAKLVGSKTVSQCKNFYFNYKKRQKLDEILQQHKMK
SEQERKARRKGKALQNEETSAPSAADEEEMEGSGGSGNEEEAQEDGEASTRYHIRAKTSS
IWYPSQTMPDISVAGAGVLGKQQVMPDAQALYEQQIIMAHESSQGAKQQPPQPIKSQHYP
SGMAEAGSPRILARTPTPSEREKEELEGGKERWLHTLLHGLHKPRAFSPLADVKKDPGPD
HIRAMGLGRPVMSPYQLSSRDLAKLSHEQLLHYNSSPSQQERLAGVRPQHIPDPPPLISS
AKPGGSITQGTPVQMHSPAHGSEHAKMTPGALPVSWTEQRKLSGFPVVKQEQLSPRGPAS
SQAENLSTHAIAHESLASRVLRLSEYRVQHVRVQHVRVQHVRVQHGTPAEVLYKGTITRL
IAEDSPSRDRSRDENQAKGHVLYEGISGHILSYERALNPKDEGRGEVLGLKRSYDVMDGG
GISRVLPLRDSLSTAEGLMCRAMPQERESPRPHHIRGSISQGIPRHVESQEEYSRREPKQ
LKRESSPSPRGPDAIKGRPHDSLVPTVKEGGRSIHLIPPEGVLMSKAPKEGSITQGTPLK
LETAGSSKRHDVRSIISSSPRPYSGLPPHLERGHYDEPGPKSRPSAVVSTSSSLVLGAEQ
AGKSHHSPVGYDEHKRAGYAAPSHRGSPLASRDTPQRPHEGSAKVPQQERKSTPTPREMS
STKSPLPVVGDHAASLASYERLLQGLGADVYRGQIPLPFDPAALPRGIPIDPAAYYLPRH
LAPAPGYPHPYPPYLIRGFPDTAALENRHTLFTDYITSQQMHQWPAAAMTQRSDLLRGPR
DPPLTLPYSPTARGASASPMDRMNYLPGAPNTFPSRAYTTSPISPVGSSHISKLQGTPTS
SERERERERERERERERDRERERDRERERERERERERDRERERERERERERDRDREREKS
LGHGNVEHAPIWRPGAAEQTGSSSSSSRPPSLPYSHQVSPMSPRPQDSLQHRPTVLHNTS
SKNLQSSEHSSPSVLRSVPQSSSRYPNYSGHLQRASEAYPDSSGVKELSRELSKTQSRGV
LPKHQEPKSESKMSSPSGGGVYPSAFAQAPGGHVGLTAGRGLPMMATESGIMNRDKTQNK
DHELRALAQQKALEQHSVFFIPEERLSPSQQPPSPAVKSSQRVVTLAQHISEVIKKDYMR
QSQQGQAGGQPVFSYHNSPVLDLTRPPSAPQTPSEPSVSSRFTPEGSNSDRDRMRDRSPP
QSKVSPVSLPPECIEPVSPPGGVSEPESQAAACPSEQAEQGMGSRSPSSSSQPPAFFSKL
TENNSAIVKSKKEMIKKMVVGNENDFNSGQPGTEIFNMPASATGGPVTMRSQPPPDSSGN
TIGLEAIIRKALMGKYDEQADERSPSNSGPSAAAADPRTEEPYSLPGKSKSSGRSNGRKT
KSPGPGLSGGERPSSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGKLELLSRHVHSLSFNF
SQIINRRSRVMSEKALCFKAMFLDRFK
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcacccgcaaccggtgcctcagagccggagagctgtggacgcccgacacctg
ccgagttcagccagccttcctctgcccatagcccgcgctcacacgagagctgaggagctg
agacttttctcctctccgtatacacgagtgcactcattacgtatgctattagatgtcagt
tctgttaaatcgtcacccttgattacacattatttttacacattgttcttctttcttttc
agaggcacagagccgcacgtccgatacgagcacatatatctacccgaagccaacagccaa
tcggaggtggagtatggcgagataaagcggcctcgcctggagatcggggcggagcctcta
atgcgtcatccgcctcagcgcccgcctctgcctctgactggagccgaggatgtcgtgaag
gtcagtgatctcaagaggaagaagagcgaaaatgctaatgagcctaacgaggaagagaag
tatatagcttccaagttagcattagcagctttacagagatccggttgtagatttatattc
agatccctgatgaacaaaccagaggcgacagcagcccttgagaagaagcagactctaaag
gcagcccgtcctcttcagggtgacagtgcagaagagcaacaacagctggaggaagaggcg
gcgaagccccaagagccagagcgcaatatttctcctccacccagcgaagccaaacaccgc
agccttgtacagatcatctacgatgagaaccggaaaaaagcagaggaggctcatcgtatc
ctagagggactgggaccccgagtggaactgccactgtataaccagccgtctgatacgaag
cagtaccacgagaacattaaaataaatcaggtgatgaggaagaagctcattctctacttc
aagaggagaaaccacgctcgcaagcaatgggagcagaagttttgtcagcgctatgaccag
ctgatggaggcttgggagaagaaggtggagcgcatagagaacaaccctcggcgcagggcc
aaagagagcaaagtgcgcgagtactacgagaaacagttccccgagatccgcaaacagagg
gagctgcaggaacgcatgcagaacagggtgggtcagcgtggtggtctggcctctgcagca
cgcagcgaacacgaagtgtctgagatcatagatggcatttcagaacaagagcagcagcaa
cagcagcaacaggtgaaccgcaacaaccaggaggagaaagaggacaaggaggcagagaag
gagggagagcgagacgaggacaagaacgacgcagatgacaaggaggatggcataaaagat
gacacgtcaggagaggacggtgaagataaagatcctcctgtagccattaaaggacgtcgc
acagccaacagccgtggccaccgaaaaggcagaatcactcgctccatggccaacgagcag
gaggaaagcagctctcctcctctcagcggggaactgggtcagtactcgcatatcaacaca
cgcactcgcatatcaacacacacattcccactactttctctttctctcgctggctgccga
aagaagctgccgctccccgtaacgcatttctgtggagatcaggtgcggctcagtcacgat
gaaacactgaaaggaagagaggaagacgagcggacgagtggacttctccaatatggccgc
aactggtcgtccatcgccaagctggtgggctccaagaccgtctcacagtgcaagaacttc
tacttcaactacaaaaagaggcagaaactggacgagatcctgcagcagcataaaatgaaa
tcggagcaggagcgtaaggccaggcgtaaaggtaaagctctgcagaacgaggagaccagc
gctccctctgctgctgatgaagaggagatggagggatccgggggcagcggcaacgaggag
gaggctcaggaggatggagaggcatccactagatatcacatcagagccaaaacatcttcc
atctggtatccaagtcaaacgatgccggacatttctgtagccggtgctggcgttttgggg
aagcagcaggtgatgcccgacgctcaggcgctctacgaacagcagatcatcatggcacac
gagtcctcccaaggagccaagcagcagcctccgcagccaatcaaatcgcagcattacccc
agcggcatggctgaggccggtagcccacggatcctagccagaacacccacgccctcggag
agagagaaagaggaactggagggggggaaggaaagatggctacacactctgcttcacgga
ttacataaaccccgagcattctctcctcttgctgatgtgaagaaagatccgggcccagac
cacatcagagccatgggtcttggtcgtcctgtgatgtcaccgtaccagctttcttccaga
gatttggccaagctgagccatgaacaactcctgcactacaactcctctccttctcagcag
gagaggctggctggtgtacggccgcagcacatccccgatcctcctcccctcatttcctcg
gccaaaccaggcggctccatcacacagggtactccagtgcagatgcacagccccgcccac
ggctccgagcacgccaagatgactccaggagctctgcctgtgtcctggacggagcagcgg
aaactctccgggttccccgtggttaaacaagagcagctgtctccacgtggccccgcctcc
tctcaggctgagaatctgtccacacatgctatcgctcatgagagcctcgcttctcgcgta
ttgaggttgagcgagtacagagtacagcacgtgagagtacagcacgtgagagtacagcac
gtgagagtacagcacggcaccccggcagaagtgctgtataagggtaccattactcgtctt
atcgcagaggacagccctagcagggacagatccagagacgaaaaccaagccaagggacac
gttctgtatgagggcatcagtggacacatcctctcctatgaacgcgctctgaacccaaag
gacgaaggcaggggagaggtgttagggctgaaacgctcttacgacgtcatggacggtggg
ggcatctctcgagtgctgccgttacgggactctctgtccactgctgagggtttgatgtgt
agagcaatgcctcaggagagagagagtcctcgtcctcatcatatccgcggctctatctca
cagggtatcccacgtcatgtagagtcccaggaagagtattcacgacgagagccgaagcag
ctgaagcgcgagagctctccgtctccccgcggccctgacgctattaagggccgcccccac
gacagcctagtgcccacggttaaagagggcggacgctccatccacctcatcccgccggag
ggtgtgctgatgagcaaagcacctaaagagggctccatcacacagggcacgcctctcaaa
ctggagaccgcgggttcatctaaacgccacgacgtgcgctccatcatatccagctctcct
cggccgtactctggtctcccacctcatttggagaggggccactacgacgagccgggcccc
aaatctcggcctagcgctgtggtcagcacctcaagctccctggtgctgggggcagaacag
gcgggcaaaagtcaccacagcccggtgggctacgacgagcacaagagagcaggatatgcg
gcaccttcacaccgaggatccccgctggccagcagagacacgccgcagcggccacacgaa
ggctctgcgaaggtccctcaacaggagaggaagtccactcccactcctcgggaaatgagc
tctaccaagtctccgctgcctgtagtgggggatcacgctgcctctctggcctcctatgag
aggctgctgcagggtctgggagccgatgtgtaccgaggacagataccgctgccgttcgac
cccgccgccctgccccggggcatccctatagatccagctgcttattacctgcctcgacac
ctggctcccgcccctggttacccccacccctatcccccttatctaatccggggcttccct
gacacagcagcccttgagaacagacacacactcttcaccgactacatcacctcacagcag
atgcaccagtggcctgcagcagctatgacacagagatcagacctactgagagggccccga
gacccaccgctcactttaccgtactcacctacagcacgaggagcgtctgcatcaccaatg
gaccgcatgaactacctccctggcgctccaaacactttccccagccgtgcgtacaccacc
tcaccgatctcacctgtcggaagctcacacataagcaaactccagggcacaccgacgtca
tccgagagagagcgcgagagagagcgtgagcgcgaaagagagcgcgagagagaccgggag
agagagcgagaccgagagagggaacgggagagagaaagagaacgagagcgggatagagag
agggagagggagcgagagagggagagagagcgggatcgagatagagagagggagaagtct
ctcggccatggcaatgtggagcacgcccccatctggagacccggagcagcagagcagact
gggagcagcagctccagctcgcgtcctccttccctgccttacagccaccaggtgtccccg
atgagccctcggccccaggacagcctccagcacagacccactgtcctgcacaacaccagc
tcgaaaaacctgcagagttcagagcacagcagcccatctgtactgaggtctgtgccacag
agttcttcacgttacccaaactacagcgggcacctccagagagccagcgaggcctatcca
gactcgagcggggtcaaagagctgagccgggagctgagtaagacccagagtcgcggagtt
ctgcccaaacaccaggagcccaagtccgaatccaagatgtccagcccgagcgggggcgga
gtttacccctcggccttcgcccaggcccccggcggccatgtggggctcacagcaggccgt
ggtcttcccatgatggctaccgagagtggcatcatgaatagggataagactcagaacaag
gaccacgagctccgtgcactcgctcagcagaaggctctagagcagcacagtgtgtttttt
attccagaggagagactgtctcccagccagcagcctccatcccctgctgttaaaagctcc
cagagagtagtgaccctcgcccaacacatcagcgaggtgattaagaaagattacatgcgt
cagtcacagcaggggcaggcaggaggccagcctgtgtttagctaccacaattcccctgtg
ttggacctcactcgacccccaagtgccccccagacgccctcggagccgagcgtcagcagc
cgctttacccccgagggctccaacagcgacagagacaggatgagagacaggtctcctcct
cagagtaaagtgtccccagtgagtctgccccctgagtgcatcgagccagtctctccacca
gggggcgtgtccgagccggaatcccaggcagcagcgtgtcccagcgagcaagccgagcaa
gggatgggatctcgctctccctccagcagttcccagccacctgcgttcttcagcaaactc
accgagaacaactccgccatcgtcaagagcaagaaggagatgattaagaagatggttgtg
ggcaacgagaatgactttaactcgggacagcccgggacagagatcttcaacatgcctgcc
tctgctactggagggccagtgaccatgcgtagccagcctcctccagactccagtgggaac
accattggcctggaggccatcatccgcaaagctctgatggggaaatatgacgaacaggcg
gacgagcgctcgccctccaactccggaccctctgctgctgctgctgatccacgcactgaa
gagccttactcactgcctggtaaatcaaagagcagcgggcgctccaacggccgcaagaca
aagtctcccggtcctggactgtcgggaggagagagaccgtcctctgtgtcctccgtccac
tccgagggagactgcaaccgccgcacacctctcaccaaccgagtgtgggaggacagaccg
tcatctgcaggtaaacttgagcttctgtctcgacatgtccactctctatcgttcaacttc
agccagattattaaccgcaggtccagagtcatgagtgaaaaggcactttgcttcaaggcc
atgttcttggaccgcttcaaataa
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integrated database retrieval system
