Pangasianodon hypophthalmus (striped catfish): 113546171
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Entry
113546171 CDS
T05759
Symbol
slc27a1
Name
(RefSeq) long-chain fatty acid transport protein 1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03320
PPAR signaling pathway
phyp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
113546171 (slc27a1)
09158 Development and regeneration
04382 Cornified envelope formation
113546171 (slc27a1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phyp01004
]
113546171 (slc27a1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113546171 (slc27a1)
Lipid biosynthesis proteins [BR:
phyp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
113546171 (slc27a1)
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
113546171 (slc27a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
113546171
NCBI-ProteinID:
XP_026801726
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MRYAVSLGSLGLLRLLGAPWSWSVAAGLGLYLGSGGWRYLYVAARTAKRDLNGVLVLLRV
KLALWRHTRNGSTIPSIFAQTVAQHPDKPALVYEATGETWTFSELDRLCNGVAHWALSQG
WGSGDVVAVLMESRPLQVVLWLGLAKLGIESALINFNLRRDSLMHCLGASGARALVFGAE
LADAVSEVSSSLSESVALFCTGDLSPDHMTSLKAQPFDSLLASAPRHPPSCTPSKGFSDR
LFYIYTSGTTGLPKAAIVVHSRYYRMAAFGYYAFGMKPDDILYDCLPLYHSAGNIIGVGQ
CLINGLTVVVKKKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSERGHRVRLAVG
NGLRPSVWEAFTQRFGIKQIGEFYGATECNCSIANMDGKVGSCGFNSMILPSVYPIRLVK
VNEETMELVRNKDGLCVPCKPGEPGLLVGKINQQDPLRRFDGYANQEATKKKIAHNVFKK
NDSAYLSGDVLVMDELGYMYFRDRSGDTFRWKGENVSTTEVEGILSSLLGQTDVAVYGVT
VPGVEGKAGMAAIAESTGSFNCESFLREVQKVLPPYARPVFLRISPQVDTTGTFKIQKTR
LQKEGFDPRITADQIYFLNSRAGRYEVVTEEVYNALVENRIPL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatgccgtgtctctcggctctctcggcctgctccggctgctcggcgcgccctgg
tcgtggagcgtggccgctggactcggcctgtacctgggctccggcggctggagatacctg
tacgtggccgcgcgcaccgccaagagggacctcaatggtgtgctggtgctcctgagggtg
aagctggcgctgtggcgtcacacgcgtaatggcagcaccatcccctccatcttcgcccag
accgtggctcagcacccggacaaacccgctctggtgtacgaggccaccggggaaacgtgg
accttctccgagctcgaccggctgtgtaacggcgtggctcattgggctctgagtcagggc
tggggctcgggggacgtggtggcggtgttaatggagagcaggcctctgcaggtggtgctg
tggctcggcctggctaaactcggcatcgagtcagcgctcatcaacttcaacctgaggcga
gactccctcatgcactgcctgggcgcgtcgggagcacgggcgctcgtttttggggcagag
ctcgctgatgccgtgtcggaggtgagctcctctctgagtgagtctgtggctctcttctgc
accggagacctgagtcctgatcacatgacctctctcaaagctcagccattcgactcgctg
ctggcgtctgcaccacgccatcctccctcctgcactccatccaagggcttcagcgaccgt
ttgttctacatttacacctcgggaactactggacttcccaaagctgctatcgtggtgcac
agtcgatattatagaatggcggcttttgggtattatgctttcggcatgaagccagatgac
atcctgtatgactgcttacctctctaccattcagcaggtaatataattggtgtcggtcag
tgtttaatcaacggactgactgtggtggtgaagaagaagttttcagccagccgcttctgg
gaagactgcatcaagtacaactgcactgtggtgcagtacatcggtgagatctgccgctac
ctgctgtctcagcctgtgcgcccatcagagcgtgggcaccgtgtgcgcctggctgtgggt
aacgggctccgccccagcgtgtgggaggccttcactcagcgcttcggcattaaacagatc
ggcgagttctacggagccaccgagtgtaactgcagcatcgccaacatggacggcaaggtg
ggatcgtgtgggtttaacagcatgattctgccgagcgtctaccccatccgtctagtgaag
gtaaacgaagagaccatggagctggtgaggaataaggacggactttgtgttccatgtaag
ccaggagaacccgggctgctggtgggcaaaatcaaccagcaggatcctctgcgtcgcttt
gacggctacgccaatcaggaagccaccaagaagaagattgcccacaacgttttcaagaaa
aacgactctgcctacctgtcgggtgacgttctggtgatggatgaactgggctacatgtac
ttccgggaccgcagtggggacacgtttcgctggaagggtgaaaacgtctccactactgaa
gtggaaggaatcctgagcagcctgctgggccagacggatgtggcagtgtacggagtcacc
gtgccaggtgtggagggaaaagcggggatggccgctatcgctgagtccacagggagcttt
aactgtgaatcctttctcagagaagtccagaaggtgttgcctccatacgctcggccagtt
tttctccgcatctccccacaagtagacactacaggtacatttaaaattcagaagaccagg
ttacagaaggagggatttgacccccgtatcacagcggaccagatctactttctgaactcc
agagcagggcgttatgaggtagtgactgaggaagtctataatgccttagtagaaaatagg
atacctctgtga
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