Pangasianodon hypophthalmus (striped catfish): 113546368
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Entry
113546368 CDS
T05759
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113546368
03012 Translation factors [BR:
phyp03012
]
113546368
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113546368
mRNA cycle factors
Stress granule specific factors
113546368
Translation factors [BR:
phyp03012
]
Eukaryotic type
Initiation factors
eIF-4
113546368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
DUF1806
Motif
Other DBs
NCBI-GeneID:
113546368
NCBI-ProteinID:
XP_026801966
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MNKPPQPITGPPSVPHPAPSPGLTPAVYPPGQPASVVFATPPPPMNSAPQPRQFAPGPRA
LHQQGGFRSLQSYYPRGSLQSNAPRVATSNPPRPVPPPHVYPSSSQMVMIPQQQLPFPPN
SQGPAYFIQSGQYRAPYVHQTQQYSVASAPAGFYPGTNPDYSSTYAGAYYPAQAQYQPSV
PAAPVMMNPAQQQQAPPPQQQAPPQQQKRERKQIRIRDPNQGGRDITEEIMSGGRTTSTP
TPPHSVGAEVSGSVQTNGESVTPAAAAPVVRLDDRVKSSSPVAPASTPPPRSDPTPEPKS
VPDVLAAPAVPVPPGQSEDAASDPSPSTSPAPTALPAEPTTSDGVDAPVPPETTPQKKEE
EQEEEEEEEPNAAPAEQPCAHVETAEPEKETEPRVEAPLPDSASNVAPTEQDTPPAAAAA
TTAAANGETESHEVTPTPAPIAMPVSEPESVPVVNGLPQDPEELQEEKLEAEPEPEPEPE
AAEVQEVDAKTSASAEEEEEEGRVEEEPVPAEETTMQAVQSVPKKKKMKKSDLNNKVVGD
VLDAYKEPEEKELAPEPAPAEVQPSEPRPAASPSPEETEETWEEKEDKLDTENIEPETVK
PVEQKYQYKEEHWKPINPEEKKRYDREFLLRFQFISASMHKPEGLPHITDVVLDKANKTP
LRPLDPSRLMNCGPDFTPSFANLGRAPPGGGRGPPPGPRRSQQGQRKEPRKIITSMSLND
DVQLNKAEKAWKPTAKKSRADEDDPEVLKTQELFRRVRSILNKLTPQMFQQLMKQVTELT
IDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTSDKPGATVNFRKLLLNRC
QKEFEKDKDDDEIFEQKQKELDAATEEEVRQRLKEELEEAKDQARRRSLGNIKFIGELFK
LKMLTEPIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFHQMEKIIK
ERKTSSRIRFMLQDVLDLRRNNWVPRRGDQGPKTIDQIHKEAELEEHREQVKVQQQLLSK
KDSSRGRGGRMGQPQDEGWNTVPISTKNRPIDTSRLSKITKPGALDFNNQLLAPGGKGSW
GSWGKGSSGGSGAKTSTEQDTGRPATSTLNRFSALQQSGPSSTSSSSSLDSERRVPQRSS
SSRERSERDRDRFDRLDRRDSREDRDRGLDRMRVAVTKRSFSRESEDRSRGGDVRRVSSM
TDERERGSRDRTASRETAVKRETAPAPTPAPSKPALSEEEVEKKSTAIVEEYLHINDLKE
AVQCVQELNSASVLFVFVRNAVESTLERSTIAREHMGLLLHKLISAAILPPEQYYKGLRE
ILEVADDMAIDIPHIWLYLAEIITPMLQDGGIPMGPLFREVAKPLLPIGKAAVLLVHILN
LLCKGLSHKKAGALWTDAGLNWKDFLPEDEDVNKFVTEQKVEFTLGEESEKPSKKELSAE
ELSKSLDRLIQDKASNQRIHDWVEANLDEQQMTSSSFVRAIMTSVCQAAIVCENPYKVDV
EQITQRAKLLQKYLVDEQKELQALYALQALMVRLEQPANLLRMFFDALYDEDVIKEEAFY
KWESSKDPAEQVGKGVALKSVTAFFTWLREAEEESDNS
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccgcctcagcctatcacaggaccgccctccgtccctcaccccgccccctcg
ccaggattgacgccggctgtttatccccctggtcagcccgcctctgttgtttttgccact
ccacctccaccaatgaactctgcaccacaacccagacagtttgcaccagggcctcgtgct
ttacatcaacagggtggattcaggtcgctgcagtcatattacccccggggcagtttgcag
agtaacgccccacgggtggcgactagtaacccgccacgccccgtcccgccccctcacgtc
tacccctcgtcctcgcagatggtgatgatcccacagcagcagctcccgttcccgcccaac
tctcagggccccgcctacttcatccagtctggacagtaccgcgcgccgtacgtccaccag
acgcagcagtattcagtggccagcgcgccggcaggcttttaccccggaaccaaccccgac
tacagctccacgtatgctggagcgtattatcccgctcaagctcagtaccagccttcagtg
cccgccgcgcctgtaatgatgaaccccgcccagcagcaacaggctccaccccctcagcaa
caagccccgccccaacagcaaaaaagggagcgcaaacagattagaatacgagaccctaat
caaggaggacgtgacatcacggaagagatcatgtctggaggaaggaccacgtctacgccc
acgcctcctcattctgtaggtgccgaggtcagcggttctgtccagacgaacggtgaaagc
gtgactcctgcagctgctgctccggtggtccgactcgatgatcgcgtgaagtcctcgagt
cctgtggctcctgcctcgactcctccgcctcgttcagaccccacccccgaacctaaatcc
gtcccggatgtcctcgctgctccggcggttcctgtgcctccaggtcaaagcgaagacgct
gcatcagatccctctccatccacgtctcccgctcctacagctctccccgcagagcccacg
acgagcgacggcgtggacgcccccgtgcctcctgaaaccacgccccaaaagaaggaggag
gagcaggaggaggaagaggaggaggagcctaacgccgcacccgccgaacagccgtgcgct
cacgtcgagaccgctgagccagaaaaggagaccgagccacgcgtcgaagcgccgctccct
gactccgcctctaatgtggcgcctaccgagcaggacacgccccctgcagcagcagcagcc
accaccgccgccgccaacggggagacggaatctcacgaggtcacgcccaccccagcaccc
atagccatgcccgtttctgagcctgagagcgtcccggtggtcaacggcctgcctcaggat
cccgaagagctgcaagaggagaaactcgaggcagaacccgagccagaacccgagcctgag
gcagccgaggttcaggaagttgatgcaaaaacatctgcttctgcagaagaggaggaagag
gagggaagagtggaggaagaacccgttcctgccgaggagacgactatgcaagctgttcag
tctgtgccaaagaagaagaagatgaagaaaagcgatctgaataataaagtggtcggagac
gtgttggacgcctataaagagccggaggagaaggagctcgctcctgagccggctcccgct
gaggtccagccctcggagcctcgtcccgccgcctctccctcccctgaggagacggaagag
acgtgggaggaaaaagaggacaaactggacacggagaacatcgagcccgagacggtgaaa
cccgtggaacagaaatatcagtataaagaggagcactggaagcccatcaatccagaggag
aagaagaggtacgatcgggaattcctgctgcgcttccagttcatcagtgcgagcatgcac
aaacccgagggccttccgcacatcaccgacgtcgttctggacaaggctaataaaacgccg
ctgcggccgctggacccgagccgtctgatgaactgcgggcctgatttcacgccttccttc
gctaatctgggcagagcgccccctggtggaggacgaggacctcccccagggccgcgtcgg
tctcagcagggtcagcgcaaagagccgcgcaagatcatcactagcatgtctctgaatgac
gacgtgcagctgaacaaggcggagaaagcctggaagccgacggcgaagaaatcccgcgcc
gacgaggacgaccccgaagtgctgaagacccaggagctgttccggagagtgcgcagcatc
ctgaacaagctgacgccgcagatgttccagcagctcatgaagcaggtcacggagctgacc
atcgacaccgaggagagactcaaaggagtcatcgacctcatattcgaaaaagccatttcc
gaacccaacttctccgtcgcttacgccaacatgtgccgctgccttatggggctgaaagtg
cccacctcggataaaccgggagccactgtgaatttccgcaaactgctgctgaatcgctgc
cagaaagagtttgagaaggacaaggacgatgacgagatcttcgagcagaagcagaaggag
ctggacgctgccactgaggaggaagttcgccagaggttgaaagaagagctggaggaagcc
aaggaccaagcccgccgccgttccctcggcaacatcaagttcatcggagagctgtttaag
ctgaagatgctgacggagccgatcatgcacgactgcatcgtcaagctgctgaagaaccac
gacgaggagagtctcgagtgtctctgcaggctcctgtccaccatcggcaaggacctggac
ttcgagaaggccaagccccgtatggaccaatacttccaccagatggagaaaataataaaa
gagagaaaaacgtcttcgaggatccgcttcatgctgcaggacgtgttggacctgagaaga
aataactgggttccccggagaggtgaccagggccctaaaaccatcgaccagatccataaa
gaggcggagctggaggaacaccgggagcaggttaaagtgcagcagcagcttctgtccaag
aaagactcgagtcgaggaagaggaggcagaatgggtcagccccaggacgagggctggaac
acggtaccgatcagcaccaagaaccggcccatcgacacgtcccgcctcagcaagatcacc
aagcctggtgctttggatttcaacaatcagcttcttgcccctggaggaaaaggatcatgg
ggcagttggggtaaagggagcagcggcggatctggagccaaaaccagcactgaacaggat
acaggacggccggctacgagcaccctgaaccgcttctcggctcttcagcagtcaggacct
tcatccacgtcctcctcatcctcgctggactccgagcgcagagttcctcaaaggagcagc
tcgagtcgagagcgcagcgagcgagaccgggaccgcttcgatcgcttggaccgccgggac
agccgcgaggaccgagaccgagggctggacaggatgcgtgtcgccgtcactaaacgcagc
ttcagcagggagagcgaggaccggtctcgaggcggagacgtgcgccgggtctccagcatg
acggacgagagggagcgcgggagccgagaccgaaccgccagccgcgagacagcggtgaag
cgtgagacggcgccggcgccgacgcccgctccgagtaaacccgccctgagcgaggaggag
gtggagaagaaatccaccgccatcgtggaggaatacctgcacatcaacgacctgaaggag
gcagtgcagtgtgtacaggagctgaacagcgcgtctgtgctcttcgtgttcgtgcgtaac
gccgtggagtcgacgctcgagcgcagcaccatcgcccgcgagcacatgggccttctgctg
cacaaactgatcagcgccgccattttacctcctgagcagtactacaaagggcttcgggag
attctggaggtggccgatgacatggccatcgacattcctcacatctggctgtatctggcg
gaaatcatcacacccatgctgcaggatggaggaatccccatggggccgctcttcagagag
gtggcgaagccgctgctgccgataggaaaagctgctgtgctgctggttcacatcctcaac
ctgctctgtaaaggactgagtcataaaaaagccggcgccttgtggactgacgccggactc
aactggaaggacttcctgcccgaggatgaggacgtcaacaagtttgtgacggaacagaaa
gtggagtttacgctgggggaggagtctgagaagccgagtaagaaggagctgagcgcagag
gaactgagcaagagcctcgaccggctgattcaggacaaggccagcaaccagaggatccac
gactgggtggaggcgaatcttgatgagcagcagatgacctccagctcgttcgtccgagcg
ataatgacctccgtgtgccaagcggcgatcgtctgcgagaacccgtataaggtggacgtg
gagcagattacccagagggccaagctgctgcagaagtacctggtggacgagcagaaggag
ctgcaggcgctctacgctctccaggctctcatggtgcgactggagcaaccggccaatctg
ttgcggatgttcttcgacgcgctgtacgacgaggacgtgattaaggaggaggcgttctac
aagtgggagtccagcaaagacccggccgagcaagtgggcaaaggcgtggccctcaaatcc
gtcacggcgttcttcacctggctccgagaggccgaggaggaatcggataacagctaa
DBGET
integrated database retrieval system
