Pangasianodon hypophthalmus (striped catfish): 113546533
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Entry
113546533 CDS
T05759
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecule (CAM) interaction
phyp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113546533
04517 IgSF CAM signaling
113546533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113546533
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
NGL family
113546533
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
VEGFR1-3_N_Ig-like
Ig_6
Motif
Other DBs
NCBI-GeneID:
113546533
NCBI-ProteinID:
XP_026802263
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MWAAMLTGLCSPFPLLWLVQLLLWPYLSGPQLAEATPPCPAPCSCSNQASRVICTRKGLD
EVPQSISVNTRYLNLQENSIQMIKSDTFKHLSHLEILQLSKNHIRQIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI
SEAAFEGLVNLRFLNLGMCGLKDVPNLTPLVKLEELELSGNQLGVVRPGSFQGLVSLRKL
WLMHSRISLIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETVETGQEIHDSARQFVNETLIAFPGPT
VSSGSTGPSGSVPSSLSPHVTRAPERPFTVSITDVANLSGLEDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGPPGGASGIAGGSTLHSGAGPGT
GGGPGPNLRIHDPEIVTLPNIGRSDHVNHYYKSHHFNNNVLGLNMGVGQTGNKTSPSSKK
QAPSTNQTATSVDSTNPGSVSPPLPIPIPMAMTFHGTLKSLSHTPSSQNEPLLLSNGSKE
SVQETQI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgccatgttaacaggcctttgtagccccttccccctcctctggttagtccag
ctcttattgtggccatatctcagtggaccccaactggctgaggcgacacccccttgcccc
gccccctgtagctgctccaatcaggcaagtcgggtgatttgtaccagaaagggactggat
gaagtcccacaaagcatctcagtcaacacacgatacctcaacctgcaggaaaactccata
cagatgatcaaatctgacacctttaaacacctgagtcacctggagatccttcagctgtca
aagaatcacattcgtcagatcgaagttggagcatttaatggcctcccaaacctcatcaca
cttgagcttttcgataatcgtctgccactggtcccatcacaagcatttgaatatctcagt
aaactgcgtgaactctggctgcgaaataatccaatagaaacgctcccagcctatgctttc
catcgtgtcccttccctccgtcgtttggaccttggtgaactcagaaagctcagtttcatc
tcagaggcggcctttgaaggactagtaaacctccgcttcctgaatttgggaatgtgtgga
ttgaaagatgttccaaacttgacgccgctcgtgaaactagaggaacttgaactttctggg
aaccagctaggcgtagttcgtccaggatcattccaaggtcttgtttcactacgcaagttg
tggcttatgcactcacgcatctcactgattgaacgcaatgcttttgatgacctaaagaac
ctagaggagcttaacctgtcccacaattccttgcattcactgccccatgacctttttaca
ccactgcaacagctcgaaagggttcacctgaaccacaatccctgggtttgtaactgcgat
gttctctggctcagttggtggttgaaggagactgtgccagataactccacctgctgtgcc
cgctgccatgctccgcctggcaccaaagggcgctacattggcgacctggatcagagagac
ttcacttgctatgctcctgtgatcgtggagcctccaactgacctgaatgtgactgaggga
atggcagcagagctgaaatgccgaactgggacatccatgacgtctgtgaactggttgaca
cctaatggaaccctgatgacccatggtgcttacaaagtacgaatctcagtgttacatgat
ggtaccctgaacttcactaatgtcaccatgcaggatactggcccatacacttgcatggtg
accaactcggccggaaacaccacggcaaccgctgtccttaacgtgtctgcctctgaccct
ggcaatggatacagctactttacaacagttactgtggaaacagtggaaacggggcaggaa
attcatgactctgctcggcaatttgtcaatgagaccttaatcgcttttccaggaccaaca
gtatcatcagggtcaacaggaccttcaggatctgtgccgtcgtccctgtcacctcatgtt
actcgtgctccagagcgcccttttacagtctctatcactgacgttgctaatctttcaggt
cttgaggacgtaatgaagacaacaaagatcataattggctgctttgtggccatcaccttc
atggctgccgtgatgcttgtggttttctacaaactaaggaagcagcaccagctgcacaaa
catcatggtcctgcccgtgccattgagataatcaatgttgaggatgaactggggccacca
gggggtgccagtggcatcgcaggtggttccactcttcactctggggcaggaccaggaact
ggcggtggacctggaccaaatcttcgaatccacgaccctgaaattgtcactctgcccaac
attgggcgctcagatcatgtcaatcactactacaaatctcaccactttaacaacaacgtt
ctgggactcaacatgggggtgggacaaactggcaacaagacaagcccctcctccaaaaaa
caggccccatctaccaatcagacagccacatctgttgactccactaatcctggatctgtc
tctcctccgttaccgattccgatcccaatggcgatgactttccacggaacactgaagagc
ttaagccacacccccagctctcagaacgagccgctgctgctgtccaatgggtccaaggag
agtgttcaggagacacagatctaa
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