Pangasianodon hypophthalmus (striped catfish): 113546546
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Entry
113546546 CDS
T05759
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03020
RNA polymerase
phyp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113546546 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
113546546 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113546546 (polr2c)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113546546 (polr2c)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113546546 (polr2c)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113546546 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
113546546
NCBI-ProteinID:
XP_026802280
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPTIAIDWVQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPRPEEWPKSEYSELEEEEVQAPYDPNGKPERFYYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccgacagtgaaaatcacagagctgacggacgaaaatgtgaag
tttgtaatcgagaacacggacctggcggttgccaactccatcaggcgagtgtttatgtct
gaggttccaaccatcgcaatcgactgggttcagatcgacgccaattcttcagttctccat
gacgagttcatcgcgcacagagtggggctcataccgctgaccagcgatgacatcgtagac
aaaatgcagtactcaagggactgcacatgcgatgatttctgtccagagtgctcagtcgaa
ctcacactggacgtgagatgcacggaagatcagacacgtcacgtgacttcacgggatctg
ctgtccaataaccctcgagttatccccgtgacgtccagaagtcgggataatgaccccaac
gactacgtagaacaggatgacatcctgctggtgaagctccgaaagggccaggagctccga
ctccgagcgtacgccaagaagggcttcgggaaggaacacgccaagtggaacccgacagca
ggggtggccttcgagtacgacccagataacgcgctgagacacacagtgtacccccgtcct
gaggaatggccgaagagtgagtactcggagctcgaggaggaagaagtccaagctccatac
gaccccaacggcaaaccagagcggttttactataacgtcgagtcgtgcggttctctccgg
cccgagacgatagtgatgtctgcgctggccgtgctcaagaagaaactgagcgacctgcag
acacagctgagccacgagatccagagtgacgtcctcaccatcaattaa
DBGET
integrated database retrieval system
