Pangasianodon hypophthalmus (striped catfish): 113546616
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Entry
113546616 CDS
T05759
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113546616 (ttf2)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113546616 (ttf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
113546616
NCBI-ProteinID:
XP_026802369
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MERVLCERHGNICFLKTGVKEGPNKGKSFYVCTGRDATPCDFTQAAELPPSHCLRHEDAL
VELQTLIHNAPQGTYRLLYRCVVGKKEGQKWCGSVPWTEKDTKKNLLSENKKQHSSLPPV
RNPFKAPGKADKTSEWEKIQEGEMDKIEVKALEKSVENESSKKSNNDEIHKKKAEKESDG
QRNSNGANAREGEAMSSAHSESWRDKKLPPGMKIRKRSSDEDKKLHSSSEVTANRSEASK
GSYSSSKCESVNEQQTEKETKSQNSQSHAKGERAAPRQSPKEKTEGHSPHLTSRKTSTSD
TDSQPGNIPKNTPEKDSQASPGSTSEGVSASLKPVTNSAQKKTVKSPFGDWSGDDDDDDD
DVQLVSVQPGSQQTASVPAAPLQKTLTSYPGFQLMSKDKSQEEDPRALHNQLTAQLKQKK
ATLSSVNVSALPDKGERLKSQVKQLEEALEALSLTSVALTGSQEADSDAQQNPKPSHSNP
FNRAGGTILLSEAPVHFQPSSSTSSLGLQLSQGYSQMYGVDPQKQAFYGGRMTEDRLLAV
RNATTEAIDHLHHSLESCPSTDTEAQDPKGMKVQLLPHQRRALAWLLWRETQKPCGGILA
DDMGLGKTLTMIALILSQKKKEEKDTQLEGWISKTDSSLVASQGTLIICPASLVHHWKKE
IERHVKSSRLSVYLYHGPNRQRSASILAEHDVVITTYSLVSKEIPVQKEDAEKPSQDSEP
VGSELPPLLRVAWARVVLDEAHNIKNPKVQTSMAVCKLRAKARWAVTGTPIQNNLLDMYS
LLKFLRCSPFDEYKLWKAQVDNGSKRGGERLNILTRSLLLRRTKDQLDSTGKPLVSLPDR
SCRVHRVKLSEDELSVYDVVFAQSRSTLQSYLKRHEGGDTKKGDGTNPFEKVAQEFGMSQ
QDSVSLSQQPQVSSTIHILSLLLRLRQCCCHLSLLKKTLDQSELQGDGIALSLEEQLCAL
SLSESSDSDPKATVSLNGSRFRSEIFDESRESTKISAVLTELKEIRKKNQKSVIVSQWTT
MLHIVAVHLKKLDLHFSVIDGTVNPKRRMDLVDEFNTNPKGPQVMLVSLCAGGVGINLTG
GNHLFLIDMHWNPALEDQACDRIYRVGQHRDVTIHRFVCEGTVEDKISSLQEKKKELAQK
VLSGTGSSFTKLSLADLRVIFGV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagttctttgtgaacgacacggcaacatttgctttctgaagactggggtgaaa
gaaggaccgaataagggtaaaagtttctatgtttgcaccgggcgggatgcgacaccgtgt
gatttcacacaggctgctgaacttccaccttctcactgtctgcgccatgaagatgcactg
gttgaacttcaaacattaattcacaatgcaccacagggcacctacaggctgctgtatcgc
tgcgtagtaggaaagaaagagggacagaagtggtgtgggagtgttccatggacagagaaa
gacactaagaagaatcttttgtcagagaacaaaaaacagcattccagtctgcctcctgtt
agaaatcctttcaaagcccctggcaaagcagacaaaacctcagagtgggaaaagattcaa
gaaggagagatggataaaatagaggtaaaggcattggaaaagtctgtagaaaatgagagc
tccaagaaaagcaacaatgatgaaattcataaaaagaaagcagagaaagaatctgacggc
caaagaaactcgaatggtgcaaatgccagggagggagaggcaatgagttctgcacattct
gaatcctggagagacaaaaaacttcctcctggaatgaagataaggaagcgatcatctgat
gaggacaagaaattgcacagcagtagtgaggtgactgcaaacagatcagaagcttccaaa
ggttcttatagtagcagtaaatgtgaaagtgttaatgaacagcaaactgagaaagagact
aaatcacagaactcccaaagccatgccaagggggagagagcagctccacggcaaagccct
aaagagaaaactgagggacacagtcctcatttaacttctaggaagacatctacatcagat
acagactctcagccaggcaatattcccaaaaatactccagaaaaagacagtcaggccagc
ccaggttcaacatcagaaggtgtttcagcttcactgaagcctgttacaaatagcgcccag
aagaaaacagtaaaatcaccgtttggagactggagtggtgatgatgatgatgatgatgat
gatgtccagttggtgtcagttcagccaggctctcagcagactgcttcagttccagccgca
cctttgcagaaaacccttacctcctaccccggcttccagcttatgtcaaaggataaaagt
caagaggaagaccccagagcactccacaaccagcttacagcccagcttaaacaaaagaag
gccactctgtcatcagttaatgtgtctgctctgcctgacaaaggagagaggctgaagagc
caagtgaagcagctggaagaggctctggaggctttaagtctgactagtgttgctcttact
gggtctcaagaagcagacagtgatgcccagcagaatcccaaacccagccattccaatcct
tttaaccgtgcagggggtactattctcctgtccgaggctccagtccattttcagccaagc
tcctctactagctcactgggactgcagctcagtcagggctactcccagatgtatggagtg
gatcctcaaaagcaagccttctatggtggcaggatgactgaggacagactgctcgctgtg
cgcaatgccacaacagaggcgattgaccacctccaccactcactggagtcttgcccttct
acagacacagaggcacaggatcccaaaggaatgaaggttcagttgttgcctcatcagaga
agagccctggcctggctgctatggagagaaacccaaaaaccctgcgggggtattctggcg
gatgacatgggtctggggaaaaccctcaccatgatcgctctcattctgtcccaaaagaag
aaggaagagaaagacactcagctagaaggatggatctctaaaactgactcatctttggtg
gcatcccagggaactctgatcatctgtcctgcctctctggtgcatcactggaagaaagag
atagagaggcatgtgaagagcagtcgcctgagtgtgtatctctaccacgggcctaaccga
cagaggagcgctagcatattggctgaacatgatgtggtgatcaccacatacagcctggtt
tctaaagagattccagttcagaaagaggatgcagaaaagcccagccaggactctgagcct
gtggggtctgagctgcctcctctcctgcgtgtagcctgggctcgtgtggttcttgatgag
gcccacaacatcaagaaccctaaagtgcaaacttccatggctgtgtgtaagctgcgggcc
aaagcacgctgggccgtcactggtacccccatccagaacaacctgctggatatgtactcg
ctgctgaagtttttgaggtgctctccatttgatgaatacaagctgtggaaggctcaggta
gacaacggctctaagagaggaggagagaggcttaacattcttaccaggtccctgctgctg
cgcaggacaaaggaccagctggactctacaggcaagcctctggtttctctgcctgaccga
agttgtagagttcacagggtaaaactgtccgaggatgagctgtctgtttacgatgtggtg
tttgcacagtccaggtccaccctccagtcctatctgaagaggcatgagggaggagacacg
aaaaaaggagatggcaccaatccctttgagaaagttgcgcaggagtttggaatgtcccag
caggattctgtgtccctctctcagcaacctcaggtttccagcaccatccatatcctgtcc
ctgctgctgcgcctcagacagtgctgctgccacctgtccctgctgaagaagacgctggat
cagtcggagctgcagggagatggaattgctctgtctctggaggagcagctgtgtgctctg
tctttgtctgaatcctctgactcagaccccaaagccaccgtttccctcaacggcagtcgg
ttccgctccgagatttttgatgagagccgagagagcaccaagatttcagccgtcctcaca
gagttaaaagaaatccgtaagaaaaatcagaaaagtgtgattgtgtcccagtggacgact
atgctgcacattgtagctgttcacttgaagaagctggatctgcacttcagtgtcatagat
ggtacagtgaaccctaagcgacgcatggaccttgtggatgaatttaacactaaccctaaa
ggacctcaggtaatgctcgtgtccttatgtgctggaggagtggggattaatctgacaggt
gggaatcatctgttcctcatagacatgcactggaaccctgcactggaagaccaggcctgt
gacagaatatacagagtgggacaacaccgtgatgtcaccattcacaggtttgtatgtgag
ggcacagtagaggataagatctcctctctgcaagagaagaagaaggagctggctcagaaa
gtcctgtctggaactgggtcctctttcaccaagctctcattagcagacctcagggttatc
tttggtgtgtaa
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integrated database retrieval system
