Pangasianodon hypophthalmus (striped catfish): 113546764
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Entry
113546764 CDS
T05759
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04136
Autophagy - other
phyp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113546764 (atg13)
04136 Autophagy - other
113546764 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113546764 (atg13)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113546764 (atg13)
Membrane trafficking [BR:
phyp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
113546764 (atg13)
Atg1 complex
113546764 (atg13)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113546764 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
113546764
NCBI-ProteinID:
XP_026802576
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MMDSDLSPQDRKDLDKFIKFFVLKTVQVIVQARLGEKICTRSSSSPTGSDWFTLAIKDIP
EVTHEAKKALAGQLPSVGRSMCVEISLKTSEGDSMELETWCLEMNEKCEKDIKVSYTVYT
RLSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQTVRVGVVGTP
IGTLTLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPLGNTALMHPCNYRAPGEEEG
GVYAGVEDSQEVCTTSFSTSPPSQCLCTVSQAHSKTPKPALMATLKVPVMGLGFSQQLCT
SRLSYQTPLLGPVDLCHPTACTAAAHPHQIAVPGKEGGVPQVLVQPNHGTQADHGRVPSC
PSADTPHPPPSNCSSGDTDVLSRSSEGKSVSPSDAPETTFTRKVGAFVNKPTTQVTTASL
DLPFAAFAPRGYDLEENDPMVQT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcgatctgagcccacaggacaggaaagacttggacaaattcatcaaattt
tttgtcttgaagaccgtgcaggtgatagtgcaggctcgtttgggcgagaagatctgcact
cgctcgtcctcttcccccacaggctcagactggttcaccctggcaattaaagacatccca
gaggtgacccatgaagcgaaaaaggctctggctgggcagctgcccagtgttgggcgctcc
atgtgtgtggagatttccctaaaaacatcagagggggattccatggagctggaaacatgg
tgcttggagatgaacgagaagtgtgaaaaggacattaaagtctcctacacggtttatacg
cgtctgtccctgcttcttaaatctctcctggccatcacgagagttactcctgcctacaaa
ctgtcacgcaaacaaggccatgattatgtcatcctgtataggatatattttggtgatgtg
caattaacaggacttggtgaaggtttccagacggtacgtgtaggagttgtaggtactccc
ataggaaccctcacgctctcctgtgcataccgcaccaatctggccctcatgtcctccagg
cagtttgagaggacgggccccatcatggggatcatcatagaccactttgtggagcgtccg
ctcgggaacacggccctcatgcacccctgcaactacagagctccaggtgaggaagaggga
ggggtttatgccggggtggaggactcacaggaagtgtgcaccacctccttttccacttct
ccaccttcccagtgtctgtgtactgtaagtcaggcacatagtaaaactcctaaacctgct
ctgatggccactctgaaggtccctgtgatggggctgggcttctcacagcaactttgcact
tctcgtctgtcatatcagacccccctcctggggccagtagacttgtgccatcctactgcc
tgcactgctgctgcccacccacaccagatagctgttccagggaaagaaggcggagtcccg
caggtgctggttcagcccaatcatggcactcaggcagatcatgggcgtgtcccgtcctgc
ccctcagcagacacgccccaccctccaccctcgaactgcagcagcggcgatacagatgtg
ttatcgagaagtagcgaagggaagagtgtgtctccttcagatgcccctgagacgaccttc
accaggaaagtgggagccttcgtcaacaaacccaccacacaggtgaccactgccagtctg
gatctgccgtttgctgcatttgctcccagaggttatgacttggaggagaacgaccccatg
gtacaaacatga
DBGET
integrated database retrieval system
