Pangasianodon hypophthalmus (striped catfish): 113546800
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Entry
113546800 CDS
T05759
Symbol
prrx1
Name
(RefSeq) paired mesoderm homeobox protein 1
KO
K09329
paired mesoderm homeobox protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113546800 (prrx1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
113546800 (prrx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
113546800
NCBI-ProteinID:
XP_026802644
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
MTSSYAHVMDRRAVAVPSRLESPITANVDNLQAKKNFSVSHLLDLEEAGEMVGAQADESV
AETGRTMLESPGLTSGSDTAQPENEQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTH
YPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQ
PIVPRPAPRPNDYLSWGSATPYSTMATYPPTCANTTSTQGMNMANSIANLRLKAKEYSLN
QVPTVN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcgcatgtaatggacagacgagccgtggcggtgcccagcagactg
gagagccccatcacagccaacgtggacaacctgcaggccaaaaagaacttctcggtgagc
cacctgttggatctggaagaagcaggggaaatggtgggcgcgcaggcggatgagagcgtg
gcggagacgggcaggaccatgctggagtctccgggtctgaccagcggcagcgacacggcg
caaccggagaatgaacagttgaattcagaggagaagaagaagcgtaagcagaggcggaac
agaaccacgttcaacagcagccaactgcaggcgctggagcgagtgttcgagaggacgcac
taccctgacgcctttgtgcgagaggatctggcccgtagggtcaatctcaccgaggcccga
gtgcaggtgtggtttcagaaccgacgagcgaagttccgccgtaacgagcgagccatgttg
gccagtaagaatgcctcgctcctcaaatcctactcaggagatgtaacagcagtggagcag
cccattgtgcctcgtcccgccccacgtcccaatgactacctatcctggggcagcgccacc
ccttacagcacaatggcaacctacccacccacttgtgccaacaccacttccacccaggga
atgaacatggccaacagcattgctaacctaagactaaaagccaaggagtacagcctcaac
caggtccccactgttaactga
DBGET
integrated database retrieval system
