Pangasianodon hypophthalmus (striped catfish): 113546802
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Entry
113546802 CDS
T05759
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113546802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113546802
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113546802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Cation_ATPase
Motif
Other DBs
NCBI-GeneID:
113546802
NCBI-ProteinID:
XP_026802649
LinkDB
All DBs
Position
Unknown
AA seq
2356 aa
AA seq
DB search
MAAALQQVLERGELSKLPKALQGKLEKYLAEQQSETDYFKAQYEQLRADSEQQYSDLEKR
HMESQDQCLSVTKEHQKLQEEFTSLDEELKSLREKTKEQESSYAKLESEQKELSKLKDEL
EAEKRDLVRTLERTSQEVEGQSEDLKRLSDRLVEVNATNMQLQLKLDKLEALEVSIKYKE
KRLEQEKDLLQGQVTWLSEELKTKSEELLSLSREKGSEILELKCSLNNKEDECARVQDQL
ASLKSSNENLQKQTEDLISKLKEAKEQQASSEEKFRNELNANIKLSNLYKGAAADAEAKG
EELSRAVEELHKLLKDAGEAHKAMEMKLAEAESCKQKEVAELKERIGILEKELDNANDLL
SDTTRRVGTTSAAVLPDEQLSTMSPTAAAVTKIKPGMKLTEIYTAYVESQEQLQLEKLEN
KRVNKYLDDIVQEVEAKAPILKRQREELERAQKSVASLSAKLEHAVQEVQRFQKEADEAN
KHSSLLERDNQRFEVQLSDMAHQVRVLLIELEEARGNHVVRDEDDVCSADVSSTSEVISQ
HLVTFRSVEELQQQNQRLLVALRELGEAQERGEMEAESTKQTELQNSLEKAQVELEQLRE
QRAHQMQLVESIVRQRDMYRVLLAQATGVSFPQQGASSEEFSLTSTPRRSPAATPTAATP
TGLVATAIESTETVEARAALKQLQEVFGAYKKEKAESEKALTEQCEKLQEQVSELRSQNA
KVSTQLEFASKRYEMLQDNVEGYRKEIASLREKSQKQAAAGQKSEQTVHTLTQDLRAANE
KLSMVESQAESLRKERDMLKMVESSLSQEKESILAQQRSQNLLLTNLKSIQATLERSETE
TRQRLTAQVEKQEREISQLQKKLEHEVEQRHALGRNHDKQLLDAKKQLEVQCALHQRTRE
QLNAAQQELNSLQQQLNTREGKVSSPSSHTGLTGLQGGDEDVEELRKRLNEAKSRTEDLA
ERLESTTASLEQYRAMCLSLEEALEKEKQVTEQVKTSVESQVLEAHEQLQQLEKKLLEAE
KEKNEIQEEKQKAAAAIEQQVSELQRNLSCLQAEHQEALQKAAMAAAQEQQAVQDSQEQA
RLATEAQDKYEQEMLLHAADVEALQAAKAQAQHASQLRQHLEEKLQSVSAQLFEARISWE
EQDKILKEEQTKIESRCQDLQKQNELLHEQIQAMSGKMATQLLQTAGDSSLNVSLTEEGK
SQEQLLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELKEVQDSLSAERERMQV
TAKTLSQHDELMKKTETMNVLVETNKMLRDEKERLEQELQQTQAKVSKLQSDILPMQESN
AELSEKSGMLQAEKKLLEEEIKRWKARTQFLVSQQKDTDPEEYKRLHSEKEAHLKRIQQL
TEETSRLKAEATRSSASVTTLQSQVQNLRENLGKVTVERDALKKELEAKTMDIHEKLKTI
TQVKKLGRRYKTQYEELKVEHDKMVAAAASAPVQDQEAQQASAQELQSLRDSLSQSETKA
RDLESQLETLNKTIGERETETRTAQDQASHLQGELTRMRQELVEKSAQEDRLRQQLAEKE
DRTRKAIVGAKQKINHLVDVKGQLVKENEELKQQREELEVRINALRSQYEGRLSRQEKEL
RELRDLREQQERHVEQRDEPVEQGPSKTQEQQRTTEQRQISLKSTPVAERGSASTSEPPT
ANIKPTPLVATPSKPPAIPGNKPTPRASIKPMITPAAVPTPTPTATVMPTTQQESQEALS
SEAPLEHVPVFGSTTGSVRSTSPNIQTTLAQPMLSVQQSQTTAFVQPTQQQSLPPTEPAS
QEPASATMMMEATPSTSQMERPSTSTAVFGTVSATPGSTLTKRPREEELDNITMELEPQE
EPSEPPNSKKFRVQRVELEMEMLAEDSTEAESVVPGGSQEAADAVEELENYPNLEEVDEE
SGASQSVPVEFLLSQVSDSHSQEEPDEPVIVIVSDSESEEEQEEETDEEEQDYEEEEDED
EDDDDDEGGIEVEGEDSNEGSGNGDPSEAYEGDNAEGPDATDPGTETEESLGATDSTQCM
SVPAPLSNSSVAFSSEPITSSAPRPPPSPRRQQQSLPRLSILAPPIQELAAPSQVQRIPA
RRQPVGRGLQLTSGVSGSTQPQQHFYEEDDRMVPSTPTLAVSHRTDCFSEALHSPQVSGV
LRFGFGLSDDVPQTSSSSTDLDQLASQGGLGIYDSPLFLPTHEDSPGGRSVPTTPLQVTA
PVTAFSETHPSEVTEHASQSVPTVSTSTPSVCVVSGPSTAEEQDILLEAGEDGSSTEVVL
ESSSQLETEEPAQPSDEASLPSTSQEPSSSSADTSSTQPPKLRTGSGRQWTRGRPTRGFV
KRDGSGVMGVRRRFAR
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgctgcagcaggtcttagagcggggcgagctctccaaactccccaaggcg
ctgcaggggaagctggagaaatacctggcggagcagcagagtgagactgattactttaaa
gcgcagtatgagcagcttcgagcggacagcgagcaacagtattctgacctggagaagcga
cacatggagagccaggatcagtgtctgtctgtaacaaaagagcatcagaaactccaggaa
gagttcacatcacttgatgaagagctaaaatctctccgagagaaaacgaaggaacaggaa
tcctcatatgcaaagctggagtcagagcagaaggagctctccaagttaaaggatgagctg
gaggctgagaagcgagacctggtgcgcacgctggaaaggacgtcgcaggaggtcgagggc
cagagtgaggatttgaaacgactcagtgacaggctggtggaagtcaacgctacaaatatg
cagctgcagctgaagctagataagctggaggctttggaagtctcaatcaagtacaaagag
aaacggctggagcaggagaaggatctgctccaggggcaggtgacctggctgagcgaggaa
ctgaagactaaaagtgaggagcttctctctctgtcacgggagaaaggcagcgagatccta
gagctcaagtgcagcctgaacaacaaagaagatgagtgtgccagagtacaggaccagctg
gccagtctgaaatcctccaatgagaaccttcagaagcaaaccgaggacctgatcagcaaa
ctgaaagaggccaaagaacagcaagccagctcagaagagaagttccgcaatgagcttaat
gccaacatcaagctgtcgaacttgtacaagggagcggcagcagatgcggaggcaaagggt
gaagagctgagccgggccgtagaagagctgcataagctgctgaaggacgcgggagaggct
cacaaagctatggagatgaagctggctgaggcggagagctgcaaacagaaggaagtggct
gaactgaaggagcgtattggcatcctggagaaagaactggacaacgccaatgatcttctg
tcagacacgacacgcagagttggcaccacatctgcagcagttctcccagatgagcagctt
agcacaatgtctcccactgcagcagccgttaccaagatcaagccaggcatgaagctcacg
gagatctacacagcatatgtagagtcccaggagcagctgcaactggagaaactggagaac
aaacgtgtgaacaagtacctggatgacattgtgcaggaggtcgaggctaaagcacccata
ctgaagaggcagagggaggagctggagcgtgcacagaaatctgtggccagtctgtctgcc
aagctggagcatgctgtgcaggaggtgcagcgctttcagaaggaggcagacgaagccaac
aagcactcatccctgctggagagagacaatcagaggtttgaggtgcagctgagtgacatg
gctcaccaggttcgggtgttgctgatcgagctggaggaggcacgtgggaatcacgtggtc
cgtgatgaggatgatgtgtgctcagcggacgtgagcagtacgtctgaggtaatttcacag
cacctggtgacgttccgcagcgtggaggaactgcagcagcagaaccagcgccttctggtg
gccctgcgtgagctcggagaagcacaggagagaggagagatggaggctgagagcaccaaa
cagacagaactacagaatagtttggagaaggcccaggttgagctggagcagcttcgagag
caacgcgcacaccagatgcagctggttgaatccattgtgcgccagcgagacatgtaccgt
gtcctgctcgcccaggctacaggggtcagcttccctcagcaaggtgcttcttcagaggag
ttctccctcacctccaccccccgtcgttcccctgcagccacacccactgcagccacaccc
actggcctcgtcgccacagcaatcgagtccacggagacagtggaggccagggctgcactg
aaacagctccaagaggtgtttggggcctataagaaagagaaggctgaaagtgagaaggct
ctgacggagcagtgtgagaagctgcaagagcaggtgtcagaactgagatcccagaacgcc
aaggtttccactcagctggagtttgcctctaaaagatatgagatgctgcaggataatgtg
gaaggttaccgtaaggagattgcctctctaagggagaaaagtcagaagcaggctgctgct
gggcagaagagcgagcagactgtccacacactcacgcaagacttgcgtgcagctaatgag
aaactgtccatggttgaatcgcaagcggagagcctgcgcaaggagagagacatgctgaag
atggtggagtctagtctgagccaggagaaagagtcgatcctcgctcagcagaggagccag
aacctcctgctcaccaatcttaaatccatccaggccacattagagcgctcggagacagag
actcggcagcggctcacagcgcaggtggagaagcaggagcgagagatttcccagctgcag
aagaaactggagcatgaggtggagcagagacacgcgctagggcgcaatcatgataagcag
cttttggatgctaagaagcagctggaggtgcagtgcgcgttgcaccaaaggaccagagag
cagctgaacgccgcccagcaggagctcaacagtctccagcagcagctgaacaccagagag
ggaaaggtttcctcacccagctcccacacaggcctcacagggctccagggtggtgatgag
gacgtagaggaactgcgtaaacgtctgaatgaggctaagagcagaaccgaggatctggct
gagagactggaaagcaccactgcttctctggaacagtacagagccatgtgcctcagccta
gaggaggccctggagaaagagaaacaggtaaccgaacaagtgaagacttcagttgaaagc
caggttttggaggctcatgagcagctgcagcaactggaaaagaagcttctagaagctgag
aaggagaaaaatgaaatacaggaagagaaacagaaagccgcggcagccattgagcagcag
gtgagcgaactgcagcggaacctgagctgtctgcaggccgagcatcaggaagcgttgcag
aaggcagctatggcggccgctcaagagcagcaggccgtgcaggatagccaagagcaggca
cgtctcgccaccgaggcccaggacaagtacgagcaggagatgctgttacacgcagccgat
gtggaggccctgcaggcagccaaagcccaggcgcaacacgcctcccagctccgccagcac
cttgaagagaagctccagtcggtcagcgcgcagctcttcgaggcccgaatatcctgggag
gagcaggacaagatcctaaaagaggagcagactaagatagagtcacgctgtcaagacttg
cagaagcagaacgagctcctacatgagcagattcaggccatgagtggaaagatggcaacc
cagctgctgcagacagccggcgatagctcactgaacgtttctctcactgaggaggggaag
tctcaggagcagctccttgagatcctcaggtttgttcgtcgggagaaagagatagcagag
tcgcgtttcgaggtggctcagggagagagtctgaggcacaggctgcgagtggagcacctg
gagcgggagctgaaggaggtccaggactctctcagtgctgagagagagaggatgcaggtg
actgcaaagaccttgtcccaacatgatgagctgatgaagaagactgagaccatgaatgtg
ctggtggagactaataagatgctacgagatgagaaggaaagactggagcaggagctgcag
caaactcaagccaaggtgagcaagctgcagtcagacatcttacccatgcaggagtccaat
gccgaactgagtgagaagagcggcatgctacaggctgagaaaaaacttctagaagaagaa
atcaagcgctggaaggcacgcactcagttcctggtgagccagcagaaggacacagaccca
gaagagtataagcggctgcactcggagaaggaagcccatcttaaacgcatccagcaactc
actgaagaaaccagtcggcttaaggctgaggcaaccaggagtagcgcttcagtcaccacg
ctgcagtctcaggtgcaaaacctgcgggagaatcttggcaaagtgacagtggaaagggat
gctctgaagaaagagctagaggccaagactatggacatccatgagaagcttaagaccatc
acacaggtcaagaagcttgggcgtcgctataaaacccaatatgaggagcttaaagttgaa
catgacaagatggtggcagctgctgcttctgctccagtccaagaccaggaggctcagcag
gcttctgctcaggagctacagagcctccgagattccctcagccaatcagagaccaaggct
cgggacctggagagccaactagaaaccttaaacaagacaataggggagcgtgaaacagaa
acacgcactgcacaggaccaggcgtcccatctgcagggcgagctaacgcgcatgcgccaa
gagctggtggaaaagtcagcccaggaagacaggctccggcagcagctggccgagaaggag
gatcgaaccagaaaggcaattgtaggggcaaagcagaaaatcaatcaccttgtggatgta
aagggtcagttggtgaaggagaacgaggagctgaagcagcagcgtgaggagctggaggtg
cgcataaatgctctgcgctcacagtatgagggccgcctgagccggcaggagaaggagctg
cgggagctgcgggacctgcgcgagcagcaggagagacatgtagagcagagagatgagcca
gtggagcaaggccccagcaaaactcaggagcagcagaggactacagaacagaggcagatt
tctctgaaatccacaccagtggctgaaaggggcagtgcaagcacctccgagcctcccaca
gctaatataaaacccacgcccctggtggcgacccccagcaagcccccagccattccaggg
aacaagcccacaccgagggccagtataaaaccaatgatcacccctgccgcagtgcccaca
cccactcctactgcaacagtgatgcccaccacccagcaggaaagccaggaagcactctca
tcagaggctcctctggagcacgtgcccgtgtttgggagcaccactggctctgtgcgctcc
accagccccaacattcagaccactctggctcagcccatgctaagtgtccagcagagccag
accactgcattcgtccagcccacacagcagcagagcttaccccccaccgagcctgcgagt
caggagcccgcctctgccaccatgatgatggaggctacacccagcacttcccagatggag
agaccgtccacatccacggctgtgtttggaacagtttcagcgacacctggcagcacctta
actaagcggcctcgagaggaggagttggataacattactatggagctagagcctcaggag
gagcccagtgagcctcccaactccaagaagttccgcgtgcagagagtggagctggagatg
gagatgctcgctgaggacagcactgaagctgagagtgttgtaccaggagggagccaggaa
gcagctgatgctgttgaggagctggaaaactatcccaacctggaagaggtagatgaggag
tctggggcatctcagtctgtacctgtggaatttctcctctcccaagtgtctgattcacac
agtcaggaagagccagatgaaccagtcatcgtcattgtcagcgactcagaaagtgaggaa
gagcaggaggaggagacggacgaagaggagcaggattatgaggaagaggaggatgaggat
gaggatgatgatgatgacgagggaggaatcgaggtggaaggagaggacagcaatgagggg
agtggcaatggagatcccagtgaggcctatgagggtgacaatgcagagggtcctgatgcc
acagacccaggtactgaaacagaggaaagtctcggtgcgacagactccacccagtgcatg
tctgttcctgccccgttatccaactcgtcagtggcgttctcctctgaaccaatcaccagc
tccgcaccccgtcctccaccgtccccacggagacaacagcaatcgctgcctcgactcagt
attctggctccacctatacaggagctagctgcaccctctcaagtccagcgcatccctgca
cgacggcagccagtcggaagaggacttcagctgacttcgggggtgtccggtagtacacag
ccacagcagcacttctatgaggaggatgaccgcatggttcccagcacccccaccctggct
gtgtcccatcgcacagactgcttcagtgaagctctccattctccccaggtatcaggcgtg
ctgcgtttcggcttcggcctctcggatgacgtcccacagaccagctcttccagcacagat
ctggaccagctggcttcgcaaggagggcttggcatatatgatagtcccctgttcctgccc
actcatgaggactcgccaggtggacgtagcgttcccaccactcctctccaggtgactgct
ccggtgacggcgttctcggagacacacccctcagaggtgacggaacacgcgtcccagtct
gtgccaacagtaagcacgtccacaccgagcgtgtgtgttgtgtctgggcccagcacagct
gaagagcaagatatcctgctcgaggcaggggaagatggaagcagtacagaggtagtgctg
gagtcgtcttctcagcttgagactgaagagccagctcagccttcagatgaggccagtctc
ccctctaccagccaggagccctcatccagctccgcagacacgagcagcactcagccaccc
aaactcaggacaggatcgggcaggcagtggacacgaggacggcccaccagaggttttgtt
aagagagatggatcaggagttatgggagtgcgaaggcgctttgccagatga
DBGET
integrated database retrieval system
