Pangasianodon hypophthalmus (striped catfish): 113546805
Help
Entry
113546805 CDS
T05759
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113546805 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113546805 (fip1l1)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113546805 (fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
113546805
NCBI-ProteinID:
XP_026802655
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSTGETEKTTGYASGDDEDWLYGDNNDDDDVDDAAGDDDDKKTETEIFSALVGDVEGANG
VDNQDVDSDSDSDDNLRITIGNIKTDRIQSTSTPVNLKTSGITTVTGAKVRGVALVAVDS
IIGTPALEVDEELEEKPWRKPGADLSDYFNYGFNEDTWKAYCDKQRRLRMSLEFMTLGSS
DKNMGSHDELVSKSDCPSRKLKSSIDVIGGQTETIIRVEGRRHHSTDGSNMQVQSSSERP
VDAEPPSSKLPPFFAPIIPPPPFPLLSISTTPPFIQHPPRPSMSVPPPGFPLPPEVPSPP
FTSGRNRGRRHRRASKQNKDSTSICVYSPVSRSSHSGHSGGSYDSCCAPLYPFAAGVYPH
ALGHMTPWLGLSDHAKVWKYKSCQDKEREKGKDRERTRERERDRELKKEQERERDQENTP
SFPSRSSDKERASRHRDHSDRERERHREHDREGREREDRHRDRRHRDHNERHKSSRSSSS
RRRHSSDDGESHRRHRYKRSKHNKDSTDTESTD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggggaaacggaaaaaacgacaggctacgctagtggggatgacgaggactgg
ctttacggagacaacaacgacgatgatgatgtggacgatgccgctggtgatgatgatgac
aagaagacagagactgaaattttcagtgctttggttggagatgtggaaggcgctaatgga
gtggataatcaggatgttgatagcgactcggacagtgatgacaacttgcgcattaccatt
ggcaacatcaaaaccgacaggatccagagcactagcactcctgtcaatctcaagacctca
ggcataaccactgtgacaggtgcgaaggtcagaggagtggctctggttgcagtggacagc
atcattggcactccagcactggaggtggatgaggagttggaggagaagccttggagaaaa
ccaggtgcggacctgtcagactattttaactatggcttcaacgaggacacctggaaggcg
tattgtgacaaacagagaagactgcgcatgagcctagagttcatgaccttaggctcgtct
gacaaaaacatgggtagtcatgatgagctcgtctctaaatcagattgcccctccaggaag
ttgaaaagctccatcgatgtaatcggagggcaaacagagaccatcattcgtgtggaaggg
cgaaggcatcacagcacagatggaagcaacatgcaggtgcagtcctcctccgaacggccc
gtggatgctgagccgccatcctctaagctgcctcctttctttgcccccatcattcctcct
ccaccttttcctcttctctccatcagcaccactcctccttttatacaacatccaccacga
ccgtctatgagtgtcccaccacctggttttccactccctcctgaagttccttctcctccc
tttacatcaggcaggaacaggggcaggagacacaggagagcgagcaaacagaacaaagac
agtacatctatttgcgtctattcgcctgtcagcaggagctcgcacagtggccattcagga
ggaagctatgatagctgctgtgccccgttgtatccctttgctgcaggtgtgtatccacat
gctctggggcacatgaccccttggctgggcttgagtgaccatgccaaagtgtggaagtat
aaaagctgccaggacaaagagagggaaaaggggaaggatagagagaggacccgggaacga
gagcgggaccgagagctgaagaaagagcaggagagagagcgcgatcaggagaacacaccc
tcatttccgagccgcagcagtgacaaagagcgtgcatcacgtcacagggaccatagtgat
cgggagagagagagacatcgggaacatgatagagaggggagagaaagagaagaccggcat
cgtgacagaagacacagggaccataacgagcgacacaaatcctcacgcagcagtagcagt
cggagaaggcattccagtgatgatggagagagccacaggagacacagatacaagcgctcc
aaacacaacaaggacagcacggacaccgagtccactgactga
DBGET
integrated database retrieval system
