Pangasianodon hypophthalmus (striped catfish): 113546841
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Entry
113546841 CDS
T05759
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
phyp04144
Endocytosis
phyp04510
Focal adhesion
phyp04540
Gap junction
phyp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113546841 (pdgfra)
04020 Calcium signaling pathway
113546841 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113546841 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113546841 (pdgfra)
04540 Gap junction
113546841 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
113546841 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phyp01001
]
113546841 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
phyp04090
]
113546841 (pdgfra)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
113546841 (pdgfra)
Protein kinases [BR:
phyp01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
113546841 (pdgfra)
CD molecules [BR:
phyp04090
]
Proteins
113546841 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
V-set
Ig_CD22
Kinase-like
Motif
Other DBs
NCBI-GeneID:
113546841
NCBI-ProteinID:
XP_026802732
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MWILKTHLLLGVVLFGILQNGACELPPPIIVSDRGEFVLELHSVFNISCTGNKSVVWEEP
LPVNTHVLPGYYTTTLLIDGAAAHHTGEYTCIYNDSDEEQPNINNMASIYIFVPDPEVPF
VPDDPTEASQFNIPCRITDPQSTVILRSLPSGDVVPYEYEEKYGFLGSFVPGQYVCETIV
NGEVVRSMVYPVTDRPNGSDMFNVMENDFSVKLTASQEEIKEGEAFNLTCTVPPGSLYVQ
KWLHPSKEAVGAIQKKETYPDKVLYILSIPHASTNDTGFYECSVTEQSSGKTHSSQVTIT
VHESSFVTLDHSGIGAVETISLLEEAEFTIYIHSDAVPKVTWFKDDNVLNTNYITAKTTL
LADKRYESVLVLRHPVEEDSGTYKILASAGSKSKEFSFKLYVKAGEPQIIQSMLAPVIWP
REETMVVFLHSMFRLTCRGQAEVVWEGPIPLDKQKLDDKRGLFVSTVTVDNAEATHTGEY
TCLYKNENQTEESSIYIFVPDPNIPFVPPPLPFGHHVLKSPEEMEVPCRVSDPSAQVTLF
HVETQQAVPATYDSKKGFLGNFTPGTYVCQALVNGEEHESEEYIVHGWTGGSGLHVEMKA
EKKALLVGETLIVNCVAKGSDLLDQQWKYPGKMADRAKMTLKENKKDQEIYYTLTVSDAR
TKDSGNYACSITDIMSNESQTKELTITVYEREFVSLAPMFAPVETAKLNDVREFQVDIEA
LPAPKVTWLKDGIVLGDTAAEFTTSLRTISETRYQSTLALIRAKAEDSGNYTVRAQIGNQ
SASHSFNLQVKVPAVIVDLMDLHHGSETGQAVVCVAGGSPVPEVEWYICKNIKQCSNDSN
EWSPLQTNTTGITIDTHIDQDNQLESQVIFGHLENTLAVRCLARNEMVAVSREIKLVANG
PHSELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQL
PYDTRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQA
LMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDTFLSRQGEK
GKKDLDIFGINPADESSRSYVILSFEEKGDYMDMKQADTMQYVPMLERSNASKYFDLQRD
DYDHPPSHKHINDSEVEKLLSDDSERLTTMDLLSFTYQVARGMEFLASKNCVHRDLAARN
VLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGI
LLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHASSDVYELMVKCWNNEPEKRPSF
HSLSESVATLLPCGYKRSYERVNNDFLKSDHPAVTRVQCVQSDETYLGVAYKNQCKMRER
ESGFEEQRLSSDSGYIIPLPDLDPLSDEEYTKRNRHSSQTSEESAIETGSSSSTLPKREV
ETLEDITLLDEMCLDSGDLVEDSFL
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactgaagacacatctccttttgggggttgtcctcttcggaatattgcaaaat
ggggcgtgtgaactgcctcctccgatcatcgtttcggatagaggggagttcgtgttagag
ctgcactccgtttttaacatcagctgtacagggaataagagcgtcgtgtgggaagaaccg
ctaccagttaacacacacgtgctgcccgggtattacaccactacgctgctgattgatggc
gccgcagctcatcacacgggagagtacacgtgcatttacaatgactcagatgaagagcag
ccaaacataaacaacatggccagcatctacattttcgtcccagaccctgaagttccattt
gttcctgacgatccgacagaggcctcccagtttaacattccttgccgcattacggatccg
caatctactgtgattctacggagtctaccaagtggagatgtggtcccatatgagtatgaa
gagaagtatggatttttgggctcctttgttcctggccagtacgtgtgtgagaccattgtg
aatggtgaggtggtccggagcatggtgtacccagtgacagacaggccaaatgggtcagat
atgtttaatgtgatggagaacgatttcagtgtgaaactaacagccagtcaagaggagata
aaagagggggaagctttcaacctgacctgcacggttccacctggtagtctctatgtccaa
aaatggttgcatcccagtaaagaggctgtaggtgctattcagaagaaggagacctaccct
gataaggttttgtatatcctcagtatcccacatgcctcaacgaatgacactggcttctac
gaatgctctgtcacagagcagtccagcggcaagacccactcctcccaagtgaccatcact
gtccatgagagttcttttgttactttggatcacagtgggattggagcagtagaaaccatc
tctctcctggaggaagctgaattcaccatttacatccattccgatgctgttcccaaggtc
acgtggttcaaagatgacaatgtattgaataccaattatataactgccaagaccactctt
ctagcagacaaaaggtacgagagtgttttggttctgcgacaccctgtagaagaggacagt
ggaacatataagattttagcatcagctggttcaaagagtaaagagttctccttcaaactc
tatgttaaagctggtgagccccagataatacagtccatgctggctccagtaatctggccc
agggaagagactatggtggtgttccttcactccatgtttagactgacgtgtcggggccaa
gcagaggtggtgtgggaaggtcccatcccccttgacaagcagaaattagatgacaagaga
ggcctgttcgtctccacagtgactgtggacaatgctgaggccacacacacaggagaatac
acctgtctctacaagaatgagaatcagacagaggagagcagcatctacatctttgtgcca
gatccgaacataccattcgtgccccccccactgccctttgggcaccatgtgctgaagagc
ccagaggagatggaggttccttgccgcgtgtctgatccgagtgctcaagtgacgctgttc
catgtggagactcagcaggccgtgcccgccacgtatgacagcaagaaaggttttctaggc
aacttcacacctgggacatatgtgtgtcaggcccttgtgaatggagaagagcatgagagc
gaggagtacattgtccatggctggacagggggctcagggctgcatgtagagatgaaggcg
gagaagaaagctctgctggttggggaaaccctcatagtaaactgtgtagccaaaggcagt
gacttgctggatcaacaatggaaatatcctggaaaaatggcggatcgtgctaagatgaca
ctaaaggagaacaagaaagatcaggagatctattacaccctgactgtgtctgatgccaga
actaaagacagtggaaattatgcctgttccatcactgacattatgagcaatgagagccaa
accaaagagctcaccattactgtctatgagagggagtttgtgtctctagctccaatgttt
gcccctgtggagacagccaaactgaatgatgttcgcgagttccaagtggacattgaggct
cttcctgcacccaaggtcacatggctgaaggatggcattgtactgggtgatactgctgca
gagtttactacctcccttcggacgatcagtgagacaaggtaccagagcactctcgctctg
attagagctaaggctgaggacagtggcaactacactgtgcgagctcagataggcaaccag
agcgccagccactcgttcaaccttcaggtcaaagttcctgctgtaattgtggacctgatg
gacctgcaccatggatcagaaacaggccaggctgtggtgtgtgttgccggaggatctccc
gtccctgaggtggagtggtacatctgtaaaaacattaaacagtgttccaatgactcaaac
gagtggtcacctcttcagaccaacaccactggcatcaccattgatacacacatagaccag
gacaaccagttggagagtcaggtgatctttggacatctggagaacacgctggccgtgcgc
tgtctggcacggaacgagatggtcgctgtgtcccgtgagatcaaactggtggccaatggt
ccgcactcagagctcactgtggcggctgctgttctggtgctgttggtcattgtcatcatc
tcactcattgtgctggtcattatctggaaacagaagccacgttatgagatcaggtggcgg
gtcattgagtcagtcagtccagatgggcatgagtacatctacgtggatcccatgcagctg
ccctacgacacacgctgggagtttccacgtgatggccttgtccttggccgtattctgggc
tcgggggcctttgggaaggtggtggaaggcactgcatatggactcagtcgttctcagcca
gtaatgaaggtcgcagtgaagatgctcaaaccaacggctcgctccagtgagaagcaagca
ctgatgtcagagctgaagatcatgactcacctgggcccccacctcaacattgttaacctg
ctgggtgcatgcaccaaatcaggtcctatctatatcattaccgagtactgtttttatgga
gacctggtgaactacttgcataagaacagagacaccttcctgagccgacagggtgagaag
ggcaagaaggacctggacatctttggcatcaatccagctgatgagagcagcagaagctac
gtgatcctgtcttttgaggaaaaaggagactacatggatatgaagcaagcagacacaatg
cagtatgtccccatgttggagaggagcaacgcctccaagtacttcgacctccagagagat
gattatgatcaccctccctctcacaaacacatcaatgacagtgaggtagaaaagcttctc
tctgatgactcagagcgcttgaccacaatggatcttctcagcttcacctatcaagtggcc
agagggatggagttcctggcctccaaaaattgtgttcacagagatttggcagctcgaaat
gtcctgttgtctcaggggaagattgtgaagatctgtgactttgggctggccagggacatc
atgcatgacaacaactatgtatccaaaggaagtaccttcctaccagtaaaatggatggcc
cctgagagcatctttgataacctctacaccactctgagtgacgtctggtcttacggcatt
ttactgtgggagatcttttctctgggtgggaccccttatcctggcatggttgtggactcc
agcttctataacaagatcaagagtggctacaggatggccaaacctgagcacgcctccagt
gatgtttatgagcttatggtgaagtgctggaacaatgagccagagaagagaccctcgttc
cacagtctgagtgagagtgtggccaccctgctgccatgcggatacaagaggagctatgag
cgtgtaaataatgacttcctgaagagcgaccacccggcggtgacccgcgtgcagtgtgtg
cagagcgatgagacctatttgggtgtggcctataagaaccagtgcaagatgagggagcgt
gaaagcggcttcgaagagcagagactgagctcagacagtggctacatcatccctctgcct
gatcttgaccccctttccgacgaagaatacaccaaaaggaaccgccatagctctcagaca
tctgaggagagcgctatagagacaggctcgagcagctccacccttcccaagcgggaagta
gagactctggaggacataacactgctggacgagatgtgcctggactcaggggatctggtg
gaggacagcttcctgtga
DBGET
integrated database retrieval system
