Pangasianodon hypophthalmus (striped catfish): 113546901
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Entry
113546901 CDS
T05759
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04020
Calcium signaling pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113546901 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113546901 (grin2a)
04082 Neuroactive ligand signaling
113546901 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113546901 (grin2a)
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Glutamate (ionotropic)
113546901 (grin2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113546901
NCBI-ProteinID:
XP_026802816
LinkDB
All DBs
Position
Unknown
AA seq
1462 aa
AA seq
DB search
MKLSTMGFSSLALLMLPALLTLVGVVHAAEKVPILNIAVILGRTRYISDRDIRALWSKDD
PIDVNVVTLLVNETDPKSIITHVCDLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIP
ILGIHGGSSMIMADKDVKSTFFQFGASIQQEALLMLNIMEEYDWHVFSIVTSKFPGYQDF
IAILKTTVDNSFVGWDLQHTITLDAVDGVDGGRAQLQLKKVQSPVILLYCSKDEAAYILE
EARSLGLTGFGYIWIVPSLTTGNPDITPDEFPSGMISVSYDDWDYPLEARVRDGLGIITT
AAAAMLKEFGDIPEAKTSCYGQMEKAKLPPSALHKYMMNVTWDGRDLSFTEDGYQENPKL
VVIVLNKDREWEKMGKWENRSLTLKYPVWPRFNSFGDTETDDNHLSIVTLEEKPFVIVEN
VERLTGTCMRNSVPCRKHIKDNSTEGGGTYIKKCCKGFCIDILKKIARNVKFTYDLYLVT
NGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSN
GTVSPSAFLEPFSASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTM
GKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQ
VTGLSDNKFQSPYSYSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVTDALVSLK
TGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQVDLAILA
IIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLATAMGLSLITFVWEHLF
YWRLRYCFTGVCSGKPGLLFTISRGIWSCIHGVHIDMKKKSPDLDFSPQANMLKLIKSAK
QMTNMTNLSGSRVNSPKRSGEYMHSAGPMIMDLMSEKGNFVYTDNRSYAQKDVYADSSDI
QSYLANRHKDHLNNYIFQGQHPLTLNESNPNTVEVAMSADAAQTAAKPRALWKKSVDTLR
QTQTPDMLGPDPRLSMKSQRYLPEEAAHSDISDCSSRAASYKDPENNKHLKPKDSLKKRS
MTSKYPRDCSEVELSYLKNKQGGTGREKIYTIDSDRELSLHSEPVHYRENRGLASDDLDF
PEMYSDHNDNYRKCEQPIIHLNSSPLHHTDVDLLPDNVFNKHYSLKDKNLSPHESNDRYK
QTHCRSCLSKVPNYATGPYGPMRSPYNRCEACVHMCNLYDISEDQMLQEAMISPSMQQDD
LFSHYWPQTDGPHVQKRNKLRLSRQHSVDNIMLEKPKEVDLNRPARSVSLKEKDRFLEDG
SYGNLFSKSDKLFGSRSMLFNHNLEESKRSKSLYPDHTTDNPFMQAIRDDTRLVHGRSSS
DIYKQFAPIKTRNENNLRSSVKSTASYCSRDGRIPNDLYISEHAMPYVANKTSAYSAPRV
LSSSQFSNRRVYKKIPSLESDV
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgagcactatggggttttccagcttggcactcctgatgctcccggctctcctc
accctggtgggcgtggtccacgccgccgagaaggttcccattctgaacattgccgtgatc
ctgggccgaacgcgctacatctcggaccgggacatccgcgccctgtggagcaaggacgac
ccgatcgacgtcaacgtggtcacgctgctggtcaacgaaacggatccgaagagcatcatc
actcatgtgtgcgacctcatgtccgggactaagatccacggcgtggtgttcggcgacggc
accgaccaggaagccatcgcccagattttggattttatttcctcgcagacgttgataccc
atcctggggattcacggcggatcgtccatgatcatggcggacaaggacgtgaagtcgacg
ttcttccagtttggagcgtccatccagcaggaggcgctgctgatgctgaacatcatggag
gaatacgactggcacgtgttctccattgtgacaagcaagtttccaggataccaggacttc
atcgccatccttaagaccacggtggacaacagcttcgttggatgggacctgcagcacacc
atcacgctggatgcggtggacggcgtggacggaggacgggctcagctccagctcaagaag
gtgcagtcgcctgtcatcctgctctactgctccaaagatgaagccgcatacatcctggag
gaggcgcgctcgctcgggctcactggattcggatacatctggatcgtacccagtttgacc
acgggcaacccggacataacacccgacgagttcccgtcaggcatgatctccgtctcctac
gacgactgggactatcccctggaagcacgggttcgagatgggcttgggatcatcaccacg
gcggcggcggccatgttgaaggagtttggtgacattcctgaagccaagaccagctgctat
gggcagatggagaaggccaagctgccgccaagtgcacttcacaagtacatgatgaacgtg
acgtgggacggtcgggatttgtccttcaccgaggacggctatcaggagaatcccaaactg
gttgtcatcgtcctgaacaaggatcgtgaatgggagaagatgggtaaatgggagaaccgc
agtctgacgctgaagtacccggtgtggccgcgcttcaactcgttcggtgacacggagacg
gacgataatcacctgagcatcgtgactttagaggagaagcccttcgtcatcgtggagaac
gtggaacgtctgacaggaacctgcatgcggaactcggtaccctgccgcaagcacatcaaa
gacaattccaccgaaggaggaggaacgtacatcaaaaagtgctgcaagggcttctgcatc
gacatcctcaaaaagatcgccaggaacgtcaagttcacctacgacctttacctggtgacc
aacgggaagcacgggaagaagatcaacaacgtgtggaacggcatggtgggagaggtggtg
tataagaaagccgtcatggccgtgggctcgctgacgatcaatgaggagcgctcggaggtc
atcgatttctccgttccctttgtggagaccgggattagtgtgatggtgtcccgcagcaac
ggcaccgtctctccctcggcctttctggagcccttcagtgcgtccgtgtgggtgatgatg
ttcgtcatgctgctcctggtcaccgccatggccgtgttcatgttcgagtacatcagtcct
ctgggctttaacaggaacctggcccagggaaaagatccgcacggaccctcgttcaccatg
ggcaaggcggtgtggctgctctggggtctggtcttcaacaactccgtccctgtgcagaac
cccaaaggcaccaccagtaagttcatcgtgtccgtgtgggccttcttcgccgtcatcttc
ctcgccagctacactgccaacctggccgccttcatgatccaggaggagttcgtggaccag
gtgacgggactgagcgacaacaagttccagagcccgtactcctactctccacccttccga
ttcgggacagtccctaacggcagcacggagagaaacatccgtaagaattatccggacatg
caccagtacatggtgaaataccatcagacgggcgtgacggacgcactggttagcctgaag
actggcaaactggatgcgtttatttacgacgcagccgtactgaattacatggcgggccgg
gacgaaggctgcaagctagtgaccattggaagtggctacatctttgctactacaggctac
ggcattgcgttacagaagggatccccttggaaacgccaagtggacctggccatcttggcc
atcattggtgacggtgaaatggaggaactggaggcccagtggctgaccgggatctgccac
aatgaaaagaacgaggtcatgagcagtcagctggatgtagacaacatggccggggtattt
tacatgctggctacggctatgggtctcagcctaatcacctttgtgtgggagcatctgttc
tactggaggcttcgctactgcttcacaggagtgtgttcaggaaagccaggcctgctcttc
accatcagcaggggtatttggagttgcattcatggtgtccatattgatatgaagaaaaag
tcccctgacttggattttagccctcaggccaacatgctgaagcttatcaagtcagccaag
cagatgacaaacatgaccaacctgagtggttcgagggtaaactcacccaaacgcagtggc
gagtacatgcactcagccgggcccatgatcatggatctgatgtcggagaaaggaaacttt
gtctacactgacaaccgaagctatgcccaaaaagacgtctatgctgactccagtgacatc
cagagctacctggctaaccggcacaaagaccacctgaacaactacatcttccagggtcaa
cacccacttacactgaacgagtccaaccccaacaccgtagaggtggctatgagtgcagac
gcagctcagactgctgccaaacccagggcactttggaaaaagtctgtggatacactacga
caaacccagacacctgacatgctgggtccagacccccgtctgtccatgaagagtcagcgc
tacctgccagaggaggcagcccactccgacatctctgactgctcaagcagagccgcctct
tacaaggatcccgagaacaacaagcacctgaagcccaaggacagcttaaaaaaaagatcg
atgacgtcaaaataccctagggattgcagcgaagtggagctgtcctacttaaaaaataag
cagggcggaacaggacgagaaaaaatctacaccatagactctgaccgggagctgagtctg
cactcggaacccgtgcattatagagagaacagaggtcttgcctctgatgatttggacttc
cctgaaatgtactctgaccataatgacaattacagaaagtgtgaacaacccatcatccat
ttgaacagcagccccctccatcatactgatgtggacctcctgccagacaacgtcttcaac
aagcattacagcttaaaggacaagaacctcagtccgcatgaaagcaacgaccgctacaaa
caaacccactgccggagttgtctgtcaaaggtacccaactatgcgacaggaccctatggc
cccatgcgctcaccttacaaccgctgcgaggcctgcgtccacatgtgcaacttgtatgac
atcagcgaagatcagatgttgcaggaggccatgatcagtcccagcatgcagcaagacgac
ttgttcagccattactggccccagacggatgggcctcacgtgcagaagaggaacaagcta
cggcttagtcgtcaacactccgtcgacaacatcatgctggagaaacccaaagaggtcgac
ctcaacaggccggcacgcagcgtcagcctcaaagagaaggaccgcttcctggaggacggc
tcgtacggaaacctgttcagcaagtccgacaaactgtttggcagcaggtccatgctcttc
aaccacaacttggaggagagcaagcgcagcaaatcgctttaccccgatcatacaacggac
aacccattcatgcaggcaatacgggatgacacacgcctggtccatggcaggagctcttct
gacatttacaaacaatttgctcctatcaaaacgaggaacgaaaacaatctgaggtcctct
gtgaagtccaccgcttcatactgttccagggatggtcgaatacccaatgacttgtacatt
tcagagcatgcgatgccttatgtagccaacaagacgagtgcatactcagctcctcgggtc
ctcagttcttctcagttcagcaatagacgagtgtataagaaaatacctagccttgagtca
gacgtttaa
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integrated database retrieval system
