Pangasianodon hypophthalmus (striped catfish): 113546975
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Entry
113546975 CDS
T05759
Name
(RefSeq) tetratricopeptide repeat protein 30A isoform X1
KO
K19683
tetratricopeptide repeat protein 30
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113546975
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
113546975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_1
TPR_12
TPR_CcmH_CycH
ANAPC3
TPR_7
TPR_6
TPR_14
TPR_8
TPR_9
TPR_Slam
ARM_TT21_C
TPR_EMC2
PocR
ARM_TT21_4th
ATP-grasp_4
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
113546975
NCBI-ProteinID:
XP_026802906
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MTLTPIKDGEFTATVYKLIKDGRYGDAIHILSNELQKHMKSRAALSLLGYCYYHVQDFTN
AADCYEQLIQLHPEVEDYKLYYAQSLYGACAFQDAMKATFLLDSPTSHTKMLKLQAAIKY
GEEDFPAAMALVEQLPVDDPDTEVDQGCLLYKLGEYEKACAKFTGAMQVLGYQPDLAYNI
ALCHYSLKQYAAALKYIREIIERGIREHPELGVGMTTEGIEVKSVGNTLVLHETALIEAF
NLKAAIEYQLKKYDDAQEALTDMPPRSEEELDPVTLHNQALMNMDTKPTEGFEKLAFLLQ
QSPFPPATFGNLLLLYCKYEYFDMAADVMAENAHLTYKFLSPYLYEFLDAMLTSQTAPEE
AFRKLDDMAGKLTEQLRKVTKQVQESRRTRDDEGLKKAVEHYDQLIEEYIPVLMAQAKIY
WNRENYNMVEKIFRKSVEFCNEHDTWKLNVAHVLFMQENKYKEAIGFYEPIVKKHYDNLE
QCNIQECPCKRKPSILNVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYNDPDK
KVFHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYNKKLGTDTWFYIKRCFLSLLENMA
KHMIMLRDAVVQDCIQFLEHCELYGKDVPAIIEQPLEEERTHIGKNTVTYEARMLKALFY
EVIGWND
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgactccgattaaagatggcgaattcaccgctacggtgtataaactgattaaa
gatggacgttatggagacgctatacacatcctgagcaatgaacttcagaaacacatgaaa
tccagagccgctctgtctctcctgggttactgctattatcatgtgcaggatttcaccaac
gcagcagattgttacgagcagctcattcagctgcacccagaggtggaagactataaactg
tactacgcccagtccctgtacggagcgtgtgctttccaggacgcaatgaaagccacgttt
cttttggacagccctacgagtcacaccaagatgctaaaacttcaagctgctataaaatac
ggagaggaagactttccagcagcgatggctttggtggagcagttgcccgtggacgacccg
gacaccgaagtggatcaaggctgcttgctgtataagctcggagaatacgagaaggcctgc
gccaagtttacaggcgccatgcaagtgctgggataccagccagatttggcttacaacatc
gctctctgtcactacagcctcaagcagtacgccgcagccctcaaatacatccgggagatc
atagagcgagggataagggagcacccagaactcggagtcggcatgacaaccgaagggatt
gaagtaaaaagcgtgggaaacacgctcgtgctgcacgagacggccttgatcgaagccttt
aacctgaaagcagccatcgaataccagctgaagaagtatgatgatgctcaggaagcgctg
actgatatgccgcccagatcagaagaggagctcgaccccgtcacgcttcacaaccaggcc
ctcatgaacatggacaccaagccgacagaaggcttcgagaagctcgccttcctcctgcag
cagagcccttttcctcccgccaccttcggcaacctgctcctgctctactgtaaatatgag
tatttcgacatggctgctgacgtcatggctgagaacgctcacctcacctacaagtttctt
tcaccatacctgtatgagtttctggacgccatgctgacgagccaaactgctccagaggag
gcgtttcggaagttagacgacatggcaggaaaactgacggagcagttacgcaaggtcacc
aaacaggtgcaggaatcacgacgcacgcgggacgacgaaggtctaaaaaaagcagtcgaa
cattacgatcagctaatcgaggaatacatccctgtgctgatggcgcaggctaagatttac
tggaaccgcgagaactacaacatggtggagaagattttccgcaagtcggtggagttctgc
aacgagcacgacacgtggaagctgaacgtagcgcacgtgctcttcatgcaggagaacaag
tacaaagaagcgatcggattctacgagcccatcgtaaagaaacactacgataacctggaa
cagtgtaacattcaggagtgtccctgcaaaagaaagccttcgatcctcaacgtgagcgcg
atcgttctggctaacctgtgtgtgtcgtacatcatgacgagccaaaatgaagaggcagag
gagctgatgaggaaaatcgagaaagaggaagagcagatctcgtacaatgacccagacaag
aaggtgtttcatctgtgcatcgtcaacctcgtgatcgggaccctgtattgcgctaaaggc
aactacgacttcgggatttctcgcgtgatcaagagtctggagccgtacaacaagaagctc
ggtacagacacgtggttctacattaagagatgcttcctgtccctgctggagaacatggcc
aagcacatgatcatgctgagggacgccgtggtgcaggactgcatccagttcctggaacac
tgcgagctgtacgggaaagacgtcccggccatcatcgagcagcctctggaggaggaacgc
acacacatcggaaaaaacacggtcacgtacgaggctcgcatgctgaaggctctgttctac
gaagtcatcggatggaacgactag
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