KEGG   Pangasianodon hypophthalmus (striped catfish): 113547020
Entry
113547020         CDS       T05759                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113547020
Membrane trafficking [BR:phyp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    113547020
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    113547020
SSDB
Motif
Pfam: LLGL Beta-prop_THOC3 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_1st WD40 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_IFT140_1st Beta-prop_WDR5 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_VPS8 EIF3I Synaptobrevin Lgl_C Beta-prop_DCAF4 Beta-prop_EML Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 113547020
NCBI-ProteinID: XP_026802980
LinkDB
Position
Unknown
AA seq 1260 aa
MKKFRKVLDGLTTSSPASAGGSPSCGSAAGTPTAAATPRELDIQETLMAEHFHICKTVRH
GFPYQPTALAFDPVQKILAIGSRSGGVRVLGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNVESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVMWDLRSKRADFRI
YYDEAIHSVSWHHEGRQFMCSHSDGSLTMWNLRNTAKPFQVTFPHGKSQRDGRKESCKPI
LKVEYKTCRNSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDHPIVEFLVLCETPY
LNEVQEPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFADCPPDIIPV
LYSIGAKHKKTGYSHKEWPVSGGTWTLGSQTYPEIIITGHADGSIKFWDATAITLQMLYK
LKTSKVFEKVKGSEGGRSAELVEEDPYAVQMVSWCPQSRIFCVVGISAHVILYRFSKHDA
NTTITALEVRLQCDVEDVISPSDTENTDVGTHSPQPPSPRSNTPDSVRDSIPCLKVKDRM
IWMPPGYQAELVIQLLWVDGEPPQQITSLDLNSAYGLLALGNCNGLAVVDYLQKTVIVCM
STLELYGSADPFQRLTRSPRKNRQSTSDFCMRGLSNFYSDSKKRIRTSYQSLTELSDNQV
SLDLERSKSPTSVPYSSYVHNEPRGTAEPVSNLRASHYSPVFYLLDNVKGPGRKLSLPTD
LKSDLDHVNGHCTSPTSQPCVSGRPRAPGAPEGPRLTRRGPGRPPFRKAQSAACMEVSLP
VSSLTEGYPSRRAMLQQLHGVSMYSHDEHHATTYSWSERESRENSFSRSRSSSVSSIDRD
TKEAVTTLQFAESYGRKSDALPTPCLWVGTSLGLVLLVPLSIATEEQERLEEPVTVAPTS
TVLMLKGSVLRFGFLDCTGALIHSAYEVWRDPHGAEDPDRPRRRKLVNFSPCSSQEASGE
GHLAVVCSERQAKVFLMPSQACLYVHNITESSFVLRADVVAVSNSVCLACFCANGHVMIL
SLPSLRPLLDVHYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMCDNLQEMLG
ELFTPTETPEAQNRGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGQGSVEGIR
VAAGGAVGDLARARIALDERGQRLGELEERTAQMMASAETFSKHAHELMLKCKDKKWYQF
NT seq 3783 nt   +upstreamnt  +downstreamnt
atgaagaagttccggaaggtgttggacggtctgaccacgtcgtctccggccagtgctgga
ggctctccgtcgtgcggcagcgctgctggaactcccactgcagcagcgactccgcgcgag
ctggacatccaggagaccctcatggcggagcacttccacatctgtaagactgtgcgtcat
ggcttcccctaccagcctacagctctagcgtttgaccctgtgcagaagattctggctatc
ggatctcgctctggaggagtgcgcgttctgggacggccaggagtggactgctattgtcag
catgagagcggagcggctgtactgcaactgcagttccttatcaatgagggagcgttggtc
acagcctgtgcagatgacactctgcacctctggaaccttcggcagagacgtccagcaata
ctgcactcgctcaaattcaacagagagcggatcacgttctgtcatcttccattccagagt
aaatggctttacgttggaacggagcggggaaacacacacattgtcaacgttgagtcattt
attttgtctggatacgtcattatgtggaacaaggccatagaactatcaacaaagacacac
ccagggcctgttgttcacctgagtgacagcccaaaagacgaagggaagctgctgattggc
tttgagagcggcactatagtgatgtgggacctgcgatcaaaaagagctgacttcagaatt
tactatgatgaggcgattcactctgttagttggcatcatgaaggacggcagttcatgtgc
agtcactctgacggaagtctcaccatgtggaacctgagaaacacagccaaacccttccaa
gtcaccttccctcacggtaaatctcagagagatggcagaaaagaatcatgtaagccaatt
ctcaaggtggagtacaagacctgcaggaacagtgagcccttcgtcatcttctctggaggt
ctgtcatatgataaagcaggcaggaggcccactctaaccatcatgcatggcaaagccatc
acagtgctggaaatggaccatcctatagtggagttcctcgtgctctgcgagacaccctat
cttaacgaggtgcaggagccatatgcagtggttgtgctactggaaaaggacttcatcgtg
gttgatcttacgcagagcaatttccctatttttgagaacccctacccaatggacatccat
gagtctccagtcacatgcacagcttattttgccgactgtccccctgacatcatccctgtg
ctgtactccataggagcaaaacacaaaaagactggctacagccacaaggagtggccagtg
agtggtggcacttggacgcttggttctcaaacatatccagagattattatcacaggacat
gcagacggatcgataaagttttgggacgccacagccatcacgttgcagatgctttacaag
ctgaagacatcgaaggtgtttgagaaggtgaagggcagtgaggggggccgcagtgccgag
ctggtggaggaggacccctatgcagtgcagatggtcagctggtgtccccaaagccgcatc
ttctgtgtggtgggcatcagtgcccatgtcatattgtaccgcttcagcaagcatgatgcc
aacaccactatcacggctctggaagtgcgtctgcagtgtgacgtggaggatgtaatctca
ccatcagacaccgaaaatacagatgtgggcactcactcaccgcagccgcccagcccgcgc
agtaacactccggatagtgtgagagacagcatcccctgtttaaaggtaaaagatcgcatg
atctggatgccccctggttaccaggctgaacttgttattcaattgttatgggttgacgga
gagccacctcagcaaatcaccagcctggatttaaactctgcctacggcctgttagctcta
ggtaactgtaatggtctggcagttgtggattatctacagaagacagtgatagtgtgcatg
agcactctggagctgtatggctcggctgaccccttccaacgtctcacacgttccccccgc
aagaaccgccagtccacatcagacttttgcatgcgtggcctgtctaacttttattcagat
tcaaagaaaaggatccgtacctcctaccagagccttaccgaactttccgataaccaggta
tctttggacctggaaaggagcaaatcacccacctcagtgccctactcctcctacgtacac
aatgagcctcggggcacggcagagcccgtgtccaatctgcgtgccagccattacagtcca
gtcttttacctgttggacaatgtaaagggaccaggcagaaagttaagtctacccactgat
cttaagagtgatcttgatcatgtgaatggacattgcactagtccaacttcgcagccatgt
gtgtctgggaggccccgtgctccaggggcccctgaggggcctcgtctcacccgccgtggg
cccggacgaccgccattccgcaaggcccagtcagccgcatgcatggaggtctctttgcct
gtgtcctccctcaccgaaggttacccgtccagacgggccatgctgcagcagttgcatggt
gtcagtatgtactcacacgatgagcaccacgccaccacctactcctggagtgagagagag
agtcgggaaaattcattcagccgatcacggagttccagtgtctctagtatagaccgggac
accaaagaggctgtgaccacgctgcagtttgcggagtcttatggccgcaagtcagacgca
ctgcctacaccatgcctatgggtgggcaccagcctgggccttgttctgctagtgcccttg
tccattgctactgaagagcaggagaggctagaggaacctgtcactgtcgcacccaccagc
acagtcttaatgctgaaaggttcagtcctgcgttttggttttctggactgcactggtgct
ttgatccacagtgcatatgaggtgtggagagatccgcatggtgctgaggaccctgatcgg
ccccgcaggagaaagttggtcaacttttcaccctgttcctcacaggaagccagcggcgaa
ggccacctggctgtggtgtgctctgaacgccaagccaaggtcttcctcatgccctcacag
gcctgcctctatgtgcacaacatcacagagtcttcattcgtgctgcgtgctgacgtggtg
gccgtctccaacagcgtgtgcctggcctgcttctgtgccaacggacatgtcatgatcctc
agcctgccaagtttacggcccctgttggatgttcactacctgccgctaacagacatgcgc
attgctagaacattctgcttcaccaatggtggtcaggccctatacctgagctctccaaca
gaaatacagcgcatcacctacagccaggagatgtgtgataatttgcaggagatgctaggg
gagcttttcacacccactgagacccctgaggcgcagaaccgaggcttcctgaagggattc
tttgggggcaatgcacagacctttgaccgagaagagctctttggtgaggcagcagcaggg
aaggcttctcgaagtctggcccagcatataccgggccagggcagcgtggagggcatacgg
gtagcagctggcggggcagtgggtgatcttgcccgagctcgaattgccctggatgagaga
ggacagagactaggggagctggaggaaaggacggctcaaatgatggccagcgctgagact
ttctccaaacacgctcatgagctgatgctgaaatgcaaagacaagaagtggtatcagttt
taa

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