Pangasianodon hypophthalmus (striped catfish): 113547033
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Entry
113547033 CDS
T05759
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113547033 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113547033 (gtf2e1)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
113547033 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
113547033 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Phage_zn_bind_3
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
113547033
NCBI-ProteinID:
XP_026803014
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MTEPEVLTEVPAALKRLAKQVVRGFYGIEHALALDVLIRNACVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFHCPNCCSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVNLSHELLEPEPTEIQALKQSRERAAQSGGSAAAGAAGREVWRT
KGSSYADLYTQNVVINMEEQESQQTQAAEAKAPKERPVWLTQSTVQGAYNENDALKAAGE
DSMVTQEGMAGRGHVQDENEEVMRALLIHEKKSAPAPVGGAIHRPPIPAANASDSESDTS
ESDEDSPVQAIAAPPKPGRLDEDDEDDEDDEFEEVGDDPMVMVGGRAYSYREVSQRPELV
EQMSTQEKEAYIEMGQNLFQDMYF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccggaggtgctgaccgaagtcccggcggcgctgaagcgcctggccaagcag
gtggtacgtggtttctacggcatcgagcacgctctggctctggacgtgctgatccgcaat
gcctgtgtgcgtgaggaggacatgctggagctgctcaagtttgaccgcaagcagctgcgc
tccgtgctcaacactctgaaagccgacaagttcgtcaagtgccgcatgcgtgtggagacg
gcgccggatggcaagaccacacgtcacaactactacttcatcaattacaggctactggtc
aacgtggtgaagtacaagctggaccacatgcggagacgcatcgagacggacgaacgcgac
tccaccaacagggcgtcgttccactgtcccaactgctgcagcacattcaccgacctggag
gccaaccagctgtttgacccaatgacagggacgttccgctgtacgttctgccagactgag
gtggaggaagacgagtcggccgtgccgaagaaagatgcgcggacgctggttgcccgcttc
aacgagcagatcgagcccatttatgtgttgctacgggagactgaagatgtcaacctgtcg
catgagctactggagcctgagcctacagaaatccaggctctgaagcagagtcgggagcgt
gcagctcaatctggaggttcagcggcggctggagcggcaggtcgggaggtctggaggacg
aagggctcgtcatatgccgatctatacacgcagaatgtcgtgatcaacatggaggagcag
gagagccagcagacccaggcagccgaggccaaagcccccaaagagagaccggtgtggctg
actcagagcaccgtgcagggcgcctacaacgagaacgacgccctcaaagccgctggcgag
gactccatggtaacccaggaaggtatggctggacgaggccatgtgcaggatgagaatgag
gaagtgatgcgtgccctcctcatccatgaaaagaagagtgcacctgcaccagtgggcgga
gccattcacaggccccccatcccggcagccaacgccagcgactcggagagcgacaccagc
gaatcggacgaggactctccggtccaagccatcgctgctccaccgaagccgggccgactg
gacgaagacgacgaggatgatgaggacgatgagtttgaggaggtgggagatgatccgatg
gtgatggtgggaggaagagcttactcctacagggaggtgagccagaggccagagctggtg
gagcagatgagcacccaggagaaggaggcctacattgagatggggcaaaacctcttccag
gacatgtacttttga
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integrated database retrieval system
