KEGG   Pangasianodon hypophthalmus (striped catfish): 113547043
Entry
113547043         CDS       T05759                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137  Mitophagy - animal
phyp04144  Endocytosis
phyp04145  Phagosome
phyp04148  Efferocytosis
phyp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113547043
   04145 Phagosome
    113547043
   04137 Mitophagy - animal
    113547043
   04148 Efferocytosis
    113547043
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113547043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113547043
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113547043
   04031 GTP-binding proteins [BR:phyp04031]
    113547043
Membrane trafficking [BR:phyp04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    113547043
 Endosome - Lysosome transport
    113547043
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113547043
  Exosomal proteins of other body fluids (saliva and urine)
   113547043
  Exosomal proteins of colorectal cancer cells
   113547043
  Exosomal proteins of melanoma cells
   113547043
GTP-binding proteins [BR:phyp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    113547043
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 113547043
NCBI-ProteinID: XP_026803025
LinkDB
Position
Unknown
AA seq 214 aa
MSARGNARTNGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKSDLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSSRSCCGN
NT seq 645 nt   +upstreamnt  +downstreamnt
atgagcgcccgtgggaacgccaggaccaacgggaacctgccccagaccaagatctgccag
tttaagctggtgctgctgggagacatggcagtgggcaagtccagcctggttctgcgcttt
gtcaagggccagttcgatgagttccaggagacaaccattggagctgctttcttggctcag
tcagtttgcttggatgacaccacggtgaagtttgagatttgggacacagccggacaggaa
cgctaccacagcctggcccctatgtactaccgtggagcccaagcagccattgtagtgttt
gatattacgaaaccggagacatttgagcgagcgaaggcctgggtgaaggaactccagagg
caggcaagtcccaacatcgtcattgcactggcaggaaacaagtccgaccttgctgacaag
agactggtggagtacgaggaggctcagacgtacgctgaagacacaggcttattgttcatg
gagacctctgccaagactgctatgaacgtgaatgagttattcctggccattgcaaagaag
atgccgaaaacagatactcagaacccgacgcatgccgcccggcacaggggagtcaacctg
caggacccagacgcccagtccagccgaagctgctgtgggaactaa

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