KEGG   Pangasianodon hypophthalmus (striped catfish): 113547053
Entry
113547053         CDS       T05759                                 
Symbol
ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113547053 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:phyp01009]
    113547053 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phyp03021]
    113547053 (ell)
Protein phosphatases and associated proteins [BR:phyp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113547053 (ell)
Transcription machinery [BR:phyp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     113547053 (ell)
    Little elongation complex (LEC)
     113547053 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL CC149 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 113547053
NCBI-ProteinID: XP_026803042
LinkDB
Position
Unknown
AA seq 629 aa
MAALKEEQCYGLSCGRVSNGSNISVFHVKLTDSAVRALEDYQSSKGLSAQPLIRFTGNQG
KITIPQSTSPNDLRTFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRAAIVIKPGGRYVGKRVQIRKPAMALSDVAPLRRFSRP
VLISSSMKKSTALPRPLRERLVHLLALKPYRKPELLVRLTKDGLSPQDKDTLDSLLQQVA
NLNSKDNTFTLKDCLFKEVQKDWPGYTEVDQQILKRILVRKLCKAQSSGPVPGENPVSPH
KEQASSSPSQKRTTEDFIDPLASKKPRISHLISKGSAPVNGKLNSSNGKDSCGLSSAPLP
LLDLSQHLEPLSDVSNDSSHNGRDCEGQEAAVAERLSQTTALTGSSLQTEAALGSTPSVP
CSLEGSKDRSSSPSLHGKSKKSKKRKDKDKSRKRDPEKDKREKKGEEDGDGSQLKKLYKV
TTSPDLSMMSIPHKSTDLNGMYNSSSIPASSSVMADYLLKYTEIGSQEQRQSYKNDFNAE
YSEYRGLHARIEGITRQFTVLDAELKQLQQGTDQYKTIHNQILQEYRKIKKTNPNYSQER
NRCEYLHNKLAHIKKLIAEYDQQQLQHWH
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggagcagtgttacggactgtcttgtggaagagtgagcaatggc
agcaatatctcagtctttcacgttaaacttactgacagtgctgtgagggcgctggaagac
tatcagagcagtaagggtctgtctgctcaaccactgatacgattcactggaaatcaaggg
aaaatcacaataccccagtccacaagtccaaatgatctgcgcacgtttacgttctatctg
tctaatgtggggagggataatccccagggcagctttgactgcatccagcagtacattaca
agtgaagggagcatacagctggactgcctgggagggatccaggataaaattacggtgtgt
gccacagacgactcttaccagaaggccaggcagagcatggctcaggcagaggaggagaca
cgcagccgtgctgccatcgtcatcaagcccggtggcagatatgtgggtaaacgggtccag
atccggaaaccagcgatggccctttcggacgtggccccgttgcggcgcttttctcgtcct
gtactcatctccagcagcatgaagaagagtacggcgctgccacggccactcagggagcgc
ctagtccacttacttgccctcaaaccctaccgcaagcctgagctgctggtgcgcctcaca
aaggacggcctctcaccccaggataaggacactttggacagcctcctgcaacaggtggct
aatctgaatagcaaggacaacaccttcacattgaaggactgtttgtttaaggaggttcag
aaggattggcctggctacactgaggtagaccagcaaattctaaagaggatccttgtacgg
aaactgtgcaaggctcagagcagtggtcccgtgcctggggagaatccagtcagtccgcac
aaagagcaggccagtagctctccatcgcagaaaagaactaccgaagattttatcgacccc
ctggcaagcaagaagcccaggatatcacacctgatcagcaagggatcagcacccgtcaac
ggaaagttgaactcttcaaatgggaaggactcatgcggcttatccagtgccccgcttccg
ctactggatctatctcagcatcttgaaccactgtcagatgtcagcaacgactcgagccac
aatggccgggactgtgaaggccaggaggcagcagtggctgagaggcttagccaaacaaca
gccttaacagggagctctctgcagacagaggcagcgttaggctccaccccttcggtgccc
tgcagcctagaaggatcaaaggaccgcagcagctcaccctcgctgcatggcaagtccaaa
aagtccaaaaaacgcaaagataaagacaagtccagaaagagagatccagagaaggacaaa
agggaaaagaaaggagaggaggacggtgacggatcgcagctgaagaaattgtacaaggtt
actacaagtccagacctgagcatgatgagtattccacataaaagcacagatctgaatgga
atgtacaacagctccagtattcctgcatcttcttctgtgatggcagactatttactaaaa
tacactgagattggctcccaggagcagcgtcagagctataagaatgactttaacgcagag
tatagtgagtaccggggactccacgcacgaatagagggtatcacccggcaattcactgtg
ctggacgctgagctgaaacagctccaacaaggcacagatcagtataagacaatccacaat
caaatacttcaagagtatcgcaaaataaaaaagactaatcccaactacagccaagagagg
aaccgctgtgaatatctccacaacaagctggcacatataaagaaacttatagcagaatat
gatcagcagcaacttcaacattggcactaa

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