Pangasianodon hypophthalmus (striped catfish): 113547135
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Entry
113547135 CDS
T05759
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113547135
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113547135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
LRR_4
Ig_3
LRR_1
ig
Ig_2
V-set
LRR_LRWD1
Sp38
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
113547135
NCBI-ProteinID:
XP_026803170
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MCGIYLKVELQMFGEAADWWMVYWWVVQLCIVGVSVEGIPPWPCPQNCECLHEPLKVNCS
SCHLNSVPEGIHKNTQSLSLANNLLKTLEKHQFSELEQLQELDLSENMLTVIEVQAFSGL
QNLLILRISQNRLKVILVGVFSGLQSLRLLDISKNEILVFLNDMFYEMPSLQKLEVNEND
LVFISNRAFSGLLYLQELNLDGYNLTSVPTEALSQLPRLVRLSFCHTGLTVLPNNSFRQL
TQLRELTLSHWHRLDTLLPNSLTGLNLTSLTLSYCNLSSVPYASLHHLVYLLYLDLSYNP
ITSIQPHLLRDLLQLQEFHLVGGNLKKVDPGAFHGLVHIQLFNVSLNQLSTLEETVFQSV
GTLQVLRLDGNPLACDCRLFWVLQRHLHLNIDGQAPSCASPVQVQGRTFQEFMESELPVL
FICRSARILNRKPQEVSVDEGQTVLFLCQVDGDPSPSVIWVSPQRTLLPTTGRIRVLSNG
TLEVRYVQVQDSGIYYCFASNVAGNDSISVSLRVRSFVTSSSRNRSAHFFLDGWSFTSTH
PPVNGSYDSQPFPFDLKTLLVAVTMGFLSFLSSVAVCFIFMFFWSQSRGQIKHTATIDFV
PHRTGAGSGGGRTRMETGRFTMKLI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggcatttacctgaaggtggaactccagatgtttggggaagctgctgactggtgg
atggtatattggtgggtggttcagctgtgcatagtaggtgtgtcagttgaaggaatccca
ccttggccatgccctcagaattgtgagtgcttacatgagcctctcaaggtcaactgctcc
tcatgtcacttaaactctgtaccggagggtatccataagaacacacaaagcctcagtttg
gccaataatctactgaagacacttgaaaaacatcagttctctgaactggaacagcttcag
gaactggatttgagtgaaaacatgctgacagtgattgaagtgcaagcattttctggcctg
caaaaccttctcattctgaggatttcccaaaatcggcttaaggtcattctggtcggagtg
ttctctggacttcagagtctccgtctgctggacattagcaagaatgaaatccttgtcttt
ctcaatgacatgttttatgagatgccatctctacagaagttggaagttaacgagaatgat
cttgtgttcatctcaaaccgtgccttcagtggcttactataccttcaggaacttaactta
gatggctataaccttacttcagtcccaactgaggcactgtcacagcttcccaggttggtg
aggctgagtttctgtcacactggtctcacagtgctacccaacaattcgtttaggcaactg
actcagctcagggagctgacattgtcccattggcacaggctggatacactattacctaat
agtttgactggactcaacctcacctctctgacactcagctactgcaacctgagttctgtg
ccctatgcttctttgcaccatctggtctatctgctctacttggacctgtcctacaaccct
atcacctccatccagccacatctgctcagagaccttctacagctgcaagagttccatttg
gttggtgggaatctgaagaaggtggatccgggtgctttccatggccttgttcatattcag
ctattcaatgtatcattaaatcaactgtcaacactggaagagactgtgttccaatcagta
gggacacttcaggtacttcggctggatgggaacccacttgcttgcgactgccgactattt
tgggtgctgcaacgtcatctgcatctaaacattgatgggcaggcacccagttgtgcctca
cctgtacaggtgcagggtagaacattccaggagttcatggagtctgagcttccagtgttg
tttatttgtagatcagcacgtattctaaaccgcaagccacaggaggtgagtgtggacgag
ggccaaacagtcctgttcctttgtcaagtggatggagacccttccccctctgtcatctgg
gtgagccctcagcggacgcttctgcccaccacaggtcggatccgtgtgctgtccaatgga
acccttgaggtgcgttatgtacaagtgcaagacagtggcatctactattgctttgcatct
aatgtggccgggaatgacagtatttctgtcagtctgcgggtgcgaagttttgtcacttcc
tcatctcggaaccgctctgcccacttctttcttgatggctggagttttacatctacccat
ccaccagtaaacggctcgtacgattctcagccatttccatttgacttgaagacgctgtta
gttgcagtaacaatgggcttcctgtcattcctgagctctgtggcagtttgctttatattc
atgttcttctggagtcagagcagagggcagatcaaacacacagccacaattgactttgta
cctcacagaacaggagcaggatctgggggaggacggaccagaatggagactggcagattt
accatgaagctcatctga
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