Pangasianodon hypophthalmus (striped catfish): 113547138
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Entry
113547138 CDS
T05759
Symbol
lrrtm2
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 2 isoform X1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
113547138 (lrrtm2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
LRR_NXF1-5
DHU1_N
Calcyon
Motif
Other DBs
NCBI-GeneID:
113547138
NCBI-ProteinID:
XP_026803175
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MGFHSRWPLVGQAPAALCVISMLLCLPLTSCTACPQKCRCEDLQFYCDTQGLLAPPDGVD
RGALGLSLRHNSINELNPDQFFGFTQLTWLHLDHNQILNVHEDAFQGLYKLKDLNLSSNR
ITKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNFLRTTPVRAFWDC
RSLEYLGLSNNRLRSLARNGFAGLIKLQELHLEHNHLTKINLAHFPRLVALQFLYLQWNK
INNLTCTMEWEWTTLEKLDLTGNEIRTLTPEVFETLPNLKVLLLDNNKLTSLDTQTTDMW
KSLNAIGLSSNLWECTKKICNLASWLSKFKGRWEHSILCHSPEYTQGEEILDAVHGFQLC
QNISAPVVLTSTTMEATLPQQFTSSFFGNMQTPTQDFYPEDFGSFTIVTTTTTTTQTPQT
TMATTMVDGEDVTEDYGMMDNTLLTQRVIIGTMALLFSFFLIVFVVYISRKCCPPTLRRI
RHCSAIQNRRQMRTQQRQPMADLATQVPYNEYEPTHEEGALVIINGYGQCKCQQLPYKEC
EV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccattcaaggtggccattggtgggacaagcaccagcggcactttgtgtgatc
agcatgctactgtgcctgcctctcacatcatgcacagcctgcccacagaaatgccgctgc
gaggacctgcagttttactgcgacacacagggactcctggcgcccccagacggcgtggac
agaggagccttgggactctcgctccggcacaacagcatcaacgagcttaaccctgatcag
ttcttcggcttcacccagctaacctggctccatttggaccataaccaaatactcaacgtg
catgaggatgccttccaggggctttacaagctcaaggacctgaatctgagctccaaccgc
atcaccaagctgcccaacacaaccttcatccacctcatcaacctccaaatcctggatcta
tccttcaaccagatgactgcactggagcctgagctctttcacgggcttcggaagctccag
atcctccacctgcggtccaacttcctgcggaccacacctgtcagggccttctgggactgt
cggagcctggagtaccttggcttaagcaacaaccggcttcggagcctggcgcggaatgga
ttcgctgggctaataaagctacaggaactccatttggaacacaaccacttgaccaagatc
aatctggcccacttcccacgtcttgtcgcactccagttcctctatctgcaatggaacaag
attaacaatttaacatgtaccatggagtgggagtggaccactctggaaaaactggatcta
actgggaatgagatacgcacgctaacccctgaagtgtttgaaactttaccgaaccttaag
gttctgctgctggataacaacaagttgaccagccttgatacccaaaccacggatatgtgg
aagtctctgaacgccatcgggttgtccagcaacctttgggaatgtacaaaaaagatctgc
aatttggccagttggcttagtaagtttaagggtcgatgggaacactccatcctatgccac
agccctgagtacacacagggtgaggaaatactagatgctgttcatggattccaactctgt
caaaacatctcagcacctgttgtactgaccagcaccacgatggaggccacgttaccccaa
cagttcactagctccttttttgggaatatgcagacaccaacacaggacttctaccctgag
gattttgggagctttaccattgtcaccactactactaccaccactcaaacccctcaaacc
accatggctaccaccatggtggatggggaagatgttaccgaggactacggcatgatggac
aacaccctactgacccagagagtcattataggtaccatggcccttttgttttctttcttt
ctcatcgtttttgtagtgtacatctcacgaaagtgctgccctcccactctgcgacggatc
cgccactgctcggccattcagaaccggcgacagatgaggacccagcagaggcagccaatg
gcagacctggccacacaggtgccctataacgagtatgagccgacacacgaagaaggtgca
ctagtgatcattaacggctacgggcagtgcaagtgtcagcaactgccttacaaagagtgt
gaagtataa
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