Pangasianodon hypophthalmus (striped catfish): 113547204
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Entry
113547204 CDS
T05759
Symbol
lrit3
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113547204 (lrit3)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113547204 (lrit3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
LRR_1
I-set
Ig_2
LRR_14
Ig_VEGFR-1-like_5th
ig
V-set
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
113547204
NCBI-ProteinID:
XP_026803250
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MRCVLAFQVLLCCLSLAQPFCPSQCTCVFHGTRTVLCNDPDTAEIPVNVPLDTVKLRVEK
TAVRRVKTEAFYYLTELRYLWLTYNSISSVDPASFYNLKVLHELRLDGNQISTFPWEALR
EMPNLRTLDLHNNRLTSVPAEAAAYLVNITYLDISSNKLNTLPSDLLDIWSPFSGMISTR
GSSQKIILGLQDNMWYCDCRISKLIEMSKMAEGPVVLMDPLVTCSGPENLAGVLFKRAEL
DQCVKPTVMTSATKITSSLGSNVLLRCDAAGYPTPTLLWSREDGSALSNPVVQESPGEGV
RWSILSLQGIVLKDTGVYRCKAKNVAGSAEAAITLSLAGMDLTTPSPPFNRTSPAVTEAV
ISFSTNITTTTSTSKPSLTTLQSIASKLNLGPGGGIQRSPPEGNTSKMEQSKNGTKDKAR
KKGSWYIRDVEVVEETGDSAVVLWMSEGFPSELPLSVVYFPYDAEEIKETVDTEVGNGKL
LLENLFPNQMYTVCLVPKSGKEQCVNFSTLDTIMDVGQLRWLLIFSGIACVLALPLIVLL
LYKISLLYCKRSSSRNTEMDDDLSKETYVKFETLAMQQRTLNGQASDLWTRRLTQESERM
LLCSRSSIDSQITYKSDNSRSEYLC
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgtgtcctggcgtttcaggtgctgctgtgctgcttgagtctcgcgcagccgttt
tgcccctcgcagtgcacctgtgtgttccacgggaccaggacggtgctgtgtaacgatccc
gacacggcggagatccccgtcaacgtacctttggacacggtgaagctgcgtgtggagaaa
acggcggtgcgtcgagtaaaaaccgaggcgttttactacctcaccgagctcaggtatctg
tggctcacctacaactccatcagctccgtggatcctgccagcttctacaacctgaaggtc
ctgcacgagctccgtctggatggaaatcaaatctccacgttcccctgggaggcgctcaga
gagatgcccaatctcaggacgttggatctgcacaataatcgattaacaagtgttcctgca
gaagctgcagcttatctggttaacatcacatacctggatatttccagcaataagctaaac
accttgccctcagaccttttggacatctggagtcccttttctggaatgatttccaccaga
ggttcctctcagaagatcatactgggcctccaggacaacatgtggtactgcgattgccgc
atatcaaaacttatcgagatgtccaaaatggccgagggtccagtggtgctgatggacccg
ctggtgacctgcagtgggccggagaacctggctggggttctgttcaaacgagcagaactg
gatcagtgcgttaaaccaacggtgatgacttcagccacgaagatcacgtcttccctcggc
agtaacgtgctcctgcgctgtgacgctgcgggttatccaacgccgacgctgctgtggagc
agagaggacggatcagcgctcagtaacccagttgtgcaggagtccccaggcgaaggtgtt
cgatggtccatccttagtctgcagggaattgtgttgaaggacaccggcgtttaccgctgc
aaggcaaagaacgttgctggaagtgcagaagccgccatcacgctatctttggctgggatg
gacctcacgactccatctcctcccttcaacaggacttctcctgctgttacagaggctgtg
atttccttttctaccaacatcaccaccaccacctccacatccaaaccatctctgacaaca
ctgcaatctatagctagcaagctgaacttaggcccaggtggaggcatccagagatctcca
cctgagggaaatacatctaagatggagcagagcaaaaatggcaccaaggataaagctagg
aagaaaggcagctggtacatcagagatgttgaggtggttgaggaaacaggagacagtgca
gttgtgttatggatgagtgaggggtttcccagtgaattgcccctgtcagtggtgtacttt
ccatacgatgcagaggagataaaggagactgtggacactgaggttggaaatggtaagctt
cttcttgagaacctgtttcccaaccagatgtacacagtctgcttggttcccaaaagtggg
aaagagcagtgtgtgaattttagcactctggacacgattatggatgttggacaactcagg
tggctgttgatcttcagtggaattgcatgtgttttggcgcttcctcttattgttcttctt
ctctacaagatctcattgctgtactgcaagaggagcagcagcaggaacactgaaatggat
gacgacctttccaaagagacttacgtgaaatttgagactctcgcgatgcagcagaggacg
ctgaatggacaggcgagcgatctctggaccagacggctgacacaggaatcagagaggatg
ctcctctgctcacgctcaagtatagactcacaaattacctacaaaagtgataactcacga
tccgagtacctttgctag
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