Pangasianodon hypophthalmus (striped catfish): 113547290
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Entry
113547290 CDS
T05759
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113547290
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
113547290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
113547290
NCBI-ProteinID:
XP_026803356
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MRKGMNVDGDCSMSVNCGNGKLRQWLIEQIDSGEYPGLVWENEEKTIFRIPWKHAGKQDY
NRDEDAALFKAWALFKGKYREGVDKPDPPTWKTRLRCALNKSNDFDELVERSQLDISDPY
KVYRIIPEGAKRGSKSSSIEDSSTHVTPLMHPIHSPYPPLQAQMSSYMLPQDRRDWRDFG
PEQTHHPPPHAELPYGPYSSRPLQWHTQPCDNGYQISGSFYTYTHSESHPVSVDPSMRSA
EALAISDFRLHVSLYYRESLVKEVTTTSPDGCRISSSPSPSSPPSPSSPGAEERLFGMPE
PVLFPYPYPQSQRRGADKLPNVLERGVLLWLTPDGLYAKRLCQGRVYWEGPLAPYSDKPN
KLEKEQTCKLLDTQHFLSEFQGYLHNGRPMPRYQVVLCFGDEYPDPQRQSKMITAQVEPM
FARQLVYYTGQTNGHYLRGYELPTQGTLPVEDYPRSLQHMQE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagggatgaatgtagatggggactgcagtatgtcagtcaactgcggcaatggc
aagctccggcagtggctcatcgagcagatcgacagcggtgagtacccaggcctggtgtgg
gaaaacgaggagaaaaccatcttcaggatcccgtggaagcacgcgggaaagcaggactac
aaccgagacgaggatgcggcactgttcaaggcctgggctctgtttaaagggaagtacagg
gagggtgtggacaagccggaccccccgacgtggaagacgagactccgctgcgccctcaac
aagagcaacgacttcgatgaacttgtggagagaagccagctggatatatcggacccttat
aaagtctacaggatcatccctgagggagcgaagagaggctccaagtccagcagcattgag
gacagctcaacacacgttacgcctctcatgcaccccatacactctccctatcctcctcta
caggctcagatgtctagctacatgctgccgcaggacaggagagactggagagacttcggt
cctgagcagacacaccatccgccgccgcatgcggagttaccgtacggtccgtattcgtcc
cggcctctgcagtggcacacgcaaccctgtgacaacgggtaccagatatccggatccttc
tacacgtacactcattcagagtcgcatcccgtgtcagtggacccaagtatgagatctgca
gaggcattggcgatctctgacttccgcctgcacgtgtcactgtactatcgcgagtctctg
gtaaaagaggtcaccaccaccagtcctgatggctgccggatctcgtcctctccctcccca
tcctctccgccctccccttcgtccccgggcgcagaggagaggctcttcggcatgcctgaa
cccgtgctcttcccgtatccataccctcagtcacagaggcgcggtgctgataagcttccc
aacgtgctggagcgtggtgtgctgctctggctcacgcctgacggactctatgccaagcgc
ctgtgccagggcagggtgtactgggaaggaccgcttgcgccgtactcggacaaacccaac
aagttggagaaggagcagacctgcaagctcctggacacacagcacttcctgtcagagttt
cagggttacctccataacggacgcccgatgcccaggtaccaggtggtactctgctttgga
gatgaatatccagatcctcagcgacagagcaagatgatcacagctcaggtggagccgatg
tttgccagacagctggtgtactacaccggtcagaccaacgggcattacctgcggggttac
gagctgcccactcagggaactctgcccgtggaggactatccgagaagtctgcagcacatg
caggagtga
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