Pangasianodon hypophthalmus (striped catfish): 113547344
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Entry
113547344 CDS
T05759
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113547344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113547344
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113547344
04031 GTP-binding proteins [BR:
phyp04031
]
113547344
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
113547344
Others
Specific organelles associated proteins
Auto phagosome
113547344
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113547344
GTP-binding proteins [BR:
phyp04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
113547344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
G-alpha
SRPRB
ATP_bind_1
AAA_22
PduV-EutP
TniB
AAA_14
DUF3713
Motif
Other DBs
NCBI-GeneID:
113547344
NCBI-ProteinID:
XP_026803444
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MAAEHKNAAPESATVCDRDSLANDSFQDSFQTRVFKIIVIGDSNVGKTCLTYRFCEAKFL
KNPEATIGVDFREKSLELGGESIKLQIWDTAGQERFRKSMVEHYYRSVHAVIFVYDVSNL
ASFESLPEWIEECRRHSVPQNVPHILVGNKCDLGRGEVPTSLAQRLADSYNFPLFETSAK
DPAEKEHVDAIFLTLAHKLKNHKPLRLKQPSESTATSLTSKQEEKKLCFC
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaacacaaaaatgctgctcctgaatccgctacagtctgtgacagagacagt
cttgcgaatgattcgtttcaagacagttttcaaacgagggtatttaaaataattgtcatt
ggtgactcgaatgttggcaaaacgtgtttaacctataggttctgtgaagctaaatttctt
aaaaacccagaagccacaatcggagttgatttcagagagaagagcctggagctgggcgga
gagagtattaagttgcagatttgggacacagcaggccaggagcgattcagaaagagtatg
gtggaacattactaccgcagcgtgcacgctgtgatctttgtttatgatgttagtaacctc
gcttccttcgaaagtctgcccgagtggatcgaggagtgtaggcgccactcagtcccacag
aacgtgcctcacatcttggtagggaacaaatgtgacttaggaagaggagaggttcccacc
tcactggcccagcgactagctgacagctataatttccccctctttgagacatctgccaag
gaccctgctgagaaggagcatgtggatgctattttcctcaccctggcccacaagctgaag
aatcacaagcctctgaggctgaaacagccaagtgaaagcactgcaacatcgctgaccagc
aagcaggaagagaagaaactctgtttctgctga
DBGET
integrated database retrieval system
