Pangasianodon hypophthalmus (striped catfish): 113547355
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Entry
113547355 CDS
T05759
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113547355 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113547355 (zcchc7)
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113547355 (zcchc7)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113547355 (zcchc7)
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113547355 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
113547355
NCBI-ProteinID:
XP_026803452
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MFSGYQEREEYEDELYAEEKHDDDSEPDSDLEFQLYSQLHYCTDDPENHPENRDENQGSS
GHETPQEPQPGRRVQPPAAPPDEVILIDSGPDVITLSDNTEEEDSVCARKGQRSKGKGVA
PVSQPQHHRQSEEVVVLDSESDQSSDSESIPPYVVDPALDSDSDSDSDGLESWMILGREK
EEGDQDIQLNVFTVRNRDQPEFVSIGGDAQNWAVSDKDKEAQICNKGAGLRRVSNRYYTE
KTVTCRNCNKLGHLSKNCPTPKKAPCCSLCGLQGHFMKTCPNRHCSNCALPGHTYDDCLE
RAYWHKRCHRCAMTGHFADVSDIHVTGSHPTSDFSFLPFQRGEQRVMLCVLDSECDSDSF
LLTTPGPPVKSPDPDAHRSPAYCYNCSGKGHFGHECTDRRMFNGTYPTLPFASSYDTQHD
IKRREHRAHLRAKELQEAGLLEQAEDAPTLQPPRKKAKNTHFRSAPVPHTPNTHTPKRRI
AHTPKHPAQTTPKPNTHLHWQDDTPVPKKKNKKNMTASTPGPYSAATPQFEGKKKKKNKK
QKQNAMNEEQDFPRSFQKSPCNKGALIHTPPYRGRKSPGVLFGSEKSKKKKHKEEKRARK
AARDPENLFLIKQRKRSR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaggctaccaggagcgggaagagtacgaagacgagctgtacgccgaggaaaaa
cacgatgacgactctgagcctgacagcgatctcgagttccagctctattcccagctccac
tactgcaccgatgacccggagaaccatccagagaaccgtgacgagaaccagggaagctcc
ggtcatgagacacctcaggaacctcaacctggccgtagagtccaacctcctgctgctcct
cctgatgaagtcattctgatcgactcgggcccggatgtcatcactctttcggataacaca
gaggaagaggacagtgtgtgtgccaggaaaggtcagaggtcaaaagggaaaggagtggct
cccgtttcacagcctcagcatcatcgtcaaagtgaggaagtggtagtcttggactcggag
tcggaccagagttcagattcggaatcgattccgccgtacgtggtggatccggctttggat
tcggattctgattctgattcggacggattggagagctggatgattctgggtcgggaaaag
gaggaaggagaccaggacatacagcttaacgtctttacggtccgcaacagggatcagcca
gagtttgtgagcatcggaggtgacgcgcagaactgggccgtctcggacaaagacaaggag
gctcagatctgcaacaaaggcgccggcttgaggcgcgtctcaaaccgctactacaccgag
aagacggtcacctgccgcaactgcaacaagctcggccacctctccaaaaactgccccact
cccaagaaggcaccatgttgttcgttgtgtggtcttcagggccatttcatgaagacctgt
ccgaaccgtcactgctcgaactgcgctcttccaggtcacacgtacgacgactgtctggag
agagcgtactggcacaaacgctgccaccgctgcgccatgaccggccacttcgccgacgtg
agtgacatccacgttacaggatcgcacccgacatcggatttcagtttccttccatttcag
cgtggagagcaaagggttatgctctgtgtgcttgattcagagtgtgatagtgatagtttc
ttgcttacgacgccgggacccccggtcaaatcccctgatcccgacgctcacagatctcct
gcgtactgctacaactgctctggaaagggacactttggccatgagtgcacagacaggagg
atgtttaacggaacgtatcccacgctgcctttcgcctcctcgtacgacacccagcacgac
atcaaacggagagagcatcgagctcacctccgagccaaagagctccaagaggccggcctt
ctagagcaggccgaagacgctcccactctccagcctccccgaaagaaagcgaaaaacaca
catttccggtctgcaccagtccctcacacacccaacacacacaccccgaagagacgcatc
gcccacacacctaaacaccctgctcagaccacgcccaaacccaacacacacctgcactgg
caggacgacacacccgtccccaagaagaagaataagaagaacatgacggcaagcacacct
ggtccttacagcgcggccacgccccagttcgagggcaagaagaagaagaagaacaagaaa
cagaaacaaaatgcgatgaacgaggaacaggactttccccgaagcttccagaaaagtccc
tgtaacaaaggagcgctcattcacactccgccgtatagagggaggaaaagcccgggagtg
ctgttcggctcggaaaagagcaagaagaagaaacacaaggaggaaaaaagggcgaggaaa
gcggccagggaccccgagaacctgtttctgatcaaacaaaggaagcgtagtagatag
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