KEGG   Pangasianodon hypophthalmus (striped catfish): 113547382
Entry
113547382         CDS       T05759                                 
Symbol
primpol
Name
(RefSeq) DNA-directed primase/polymerase protein isoform X1
  KO
K22761  DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113547382 (primpol)
   03029 Mitochondrial biogenesis [BR:phyp03029]
    113547382 (primpol)
Enzymes [BR:phyp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113547382 (primpol)
    2.7.7.102  DNA primase AEP
     113547382 (primpol)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    113547382 (primpol)
Mitochondrial biogenesis [BR:phyp03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA polymerase
    113547382 (primpol)
SSDB
Motif
Pfam: Herpes_UL52
Other DBs
NCBI-GeneID: 113547382
NCBI-ProteinID: XP_026803498
LinkDB
Position
Unknown
AA seq 552 aa
MTRGKWQDRVKAVEQRALSYQSAPISCPYKARLSRPWQPSSVWRLFPRQSDAIAFSQRCK
QHMHVFALEKESTDAGHRVYLVTSYSELWHYYSSHRQSLMHCYEVIPEGAVCKLYFDLEF
DVASNTHLDGIKMVVSLIQYVCVKLEETYSLQCSAKDVLNLDSSTAEKFSRHLIFLLPDC
AFKDNKHVGSLIHHILKPALKYLHKGAENPPEDVDDVSEGPQSKRMKRDEDEEDLGFLIV
KGKDGKKQLFVDLASTITEDDLNTVYYAGVYTKNRNFRLYKSSKLGKNAAFSVAEDNKFV
PSSNKHTTEEERIFLASLVTNVSFTSQRILTFDAPERTSNESGCSARHRGPHSSELAGEH
QASPYKELDDFVLKLALRDGIQGNIRRWTYFVSEQLLVYDVGKYRWCSNVGRFHKSNNIM
IIVDLKEEVWYQRCHDPECRRQNYRSSSYPLPQEVCMSYMLKEDEDDQQFLMDELGNIEL
SPSCVPARASGEGEETDRSASHPQTENTQECWDDDASCLEALDEVERSMEEKEEIPDELM
IQAVSECEATLV
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgacgaggggaaagtggcaggacagagtgaaggcggtggagcagagggctctatcctac
caatccgcccccatcagctgcccgtataaagctcgtctgtcccggccgtggcagccgtcc
tccgtatggaggctgttccctcgccagagcgacgccatcgccttcagccagcgctgcaaa
cagcacatgcacgtgtttgctctggagaaagagagcacagacgcaggacacagggtttat
ttagtgaccagctacagtgagctctggcactactacagttcacacagacagtcactgatg
cactgctatgaggtgattccggagggagccgtctgcaagctctacttcgacctggagttt
gacgtagcctctaacacacacctggatggcataaagatggtggtgtcgctgattcagtat
gtgtgtgtgaagttggaggagacgtacagtctgcagtgctcggcaaaagacgtgctgaat
ctggactccagcacagccgagaagttcagccgccatctcatcttcctgctccccgactgt
gcgttcaaggacaacaagcatgtcggtagtctcatccatcacatactcaaaccagcgctg
aaatatctccataaaggcgctgagaaccctccagaagacgtcgatgatgtcagcgagggg
cctcagtcgaagagaatgaagcgtgatgaagatgaggaagacctgggctttttgatagtg
aagggaaaggatgggaaaaagcagctgtttgtggatctcgcatctacaataacggaggac
gatctaaacaccgtgtattacgcaggtgtgtacaccaaaaaccgaaacttccgcctgtac
aagtcttccaagctggggaagaacgctgcgttctccgtagctgaggataacaagtttgtc
ccgagttccaacaagcacactacagaggaggaacgcattttcctagcctctttggtcacc
aatgtgagcttcacgtctcagaggattctgacgtttgatgctccggagaggacttcgaac
gaatctgggtgttcggctcgacacagaggcccacacagctcagagcttgcaggtgaacat
caggcctcgccgtacaaggaactggacgactttgtgctgaagctggcgctcagggatggc
attcaaggaaacattaggcgctggacctacttcgtatcggagcagctgctggtctacgac
gttgggaagtaccgctggtgttctaacgtgggtcgcttccacaagagcaacaacatcatg
atcatcgtggatctgaaagaagaggtgtggtaccagaggtgccatgatcctgagtgcagg
agacagaactacagatcctctagttacccgctaccacaggaggtgtgtatgagctacatg
ctgaaggaggacgaggacgatcagcagttcctcatggacgagctgggaaacatcgagttg
agtccgagctgcgtccctgcacgcgcttcaggagagggcgaggaaacggaccgatccgct
tcacacccccagacggagaacacgcaggagtgctgggatgacgatgcttcgtgcctggag
gcgctggatgaagtggagaggagcatggaggaaaaagaggagattcctgatgagctcatg
atccaggcggtgagcgagtgcgaggctacactcgtctga

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