KEGG   Pangasianodon hypophthalmus (striped catfish): 113547514
Entry
113547514         CDS       T05759                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2 isoform X1
  KO
K24823  protein PAT1 homolog 2
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113547514 (patl2)
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     113547514 (patl2)
SSDB
Motif
Pfam: PAT1 Kre28
Other DBs
NCBI-GeneID: 113547514
NCBI-ProteinID: XP_026803689
LinkDB
Position
Unknown
AA seq 686 aa
MSDSENPLLYALQEEKGDSVPEASWPENGDQWSDGEDGGEMEESGLIQEMVEEDEEIDLY
NEETFGLDLNAEDLEADPVDLLLMEGNESPSPRPPSPHKPSPPSPKAEIEPQAPAGLSEK
SRSRRERVGKGQLLDDPAVMRTVEGPPSLKSLDSAIVDCGRSSGWGDLNANTWMMSPYGP
MRQTPLLQDKAIVRVIDRSSRGRLQFASPTLRSPLQRALPQQAPVCPVMPRSPLRPQSPF
SIKQRYNQPGVYLSPSTPRFHSPKMMPLQFGPNSPRPGPCFSPLPSPLPQRFRFPVLATQ
LHPQHKRLLSQRPQGFRRKPKDWDHYAELMSAKEKEWIIKLQMIQLQSENPHQDDYYYQE
YYRRLETKLAEEEMLGDRSKREPPKLTTPYINKTVSYTPVVHIEGSLGQVAVSTCYSPRR
AIDAVHGHTVEEQKDIRQQRLEVLNTIEKCYIILLGVEEAERMKASVSDEEERQRRLKTI
QRGVEQISSQLCNPNSLESAEEFLPCLLVSKGKKLLARLLPFLSHDASLQVLRAITTHLP
VLMSRDVDEALPVLYPSLRAVIGTLTFSQLVSILQDFTTPLPDSKDSRLTLACQNKFGLS
LLYVLLSQGERLLTSDVPMEPSIGDFETWTDTVFHVARQLSRSSLIEPLCLPSNLLTLFC
RYLDKRTVQQLKNNMESSTGYLAVGS
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgagtgactctgagaacccgttgttgtatgctttacaggaggagaagggtgactctgtt
cccgaggccagctggcctgaaaatggagatcagtggagcgatggagaagatggaggagaa
atggaagaatctgggctcattcaagaaatggtggaagaagatgaagagattgacctgtac
aatgaagagacctttggattagacctaaatgctgaggatctggaggcagatcctgtcgat
cttctgttaatggaaggaaacgagtccccctcaccccgtcctccatcaccacacaagccc
tctcctcccagccctaaagccgaaatcgagccccaggctcccgcgggcctgagtgaaaag
tcccgcagccgaagggagcgagtcggtaaggggcagctgctggatgacccagctgtgatg
aggactgtggaaggtccaccaagtctcaagagtttggacagcgctattgtggactgtgga
cgcagttcaggctggggagatctcaacgcaaacacgtggatgatgtcaccttacggccca
atgagacaaacgcctctcttacaagacaaagccattgtgcgagtgatcgacaggtcgtct
cgtggaaggctgcagtttgcgtctcctaccttgcgatccccgctgcagagggctctccct
cagcaggcgcctgtgtgtccggtgatgcctagatctccactacgccctcaaagtccattc
tcaattaaacagcgttacaaccagccaggcgtttatctttcaccctccacaccacgcttc
cactctcccaaaatgatgccgctgcagtttggaccaaactcaccccggcccgggccctgc
ttcagccctttacccagtcccctccctcagagattcaggttcccagtcctggcgacccag
ctccatccacagcacaagagattgctgagtcagcgtcctcaaggctttcggagaaagcca
aaggattgggatcattatgctgagcttatgtcagccaaagagaaggagtggatcattaag
ttgcagatgatccagctacaaagtgagaacccgcatcaggatgattactactaccaggag
tactaccggagattggagaccaaattggctgaggaagaaatgctgggtgaccgctcgaag
agggaaccacccaaactcaccacaccatacatcaacaaaactgtatcatacactccagtg
gttcatatcgagggctcgctgggtcaagttgccgtttctacgtgttactcaccacgtcga
gccattgatgctgtccatggtcacactgtggaggaacagaaagacatcagacagcagaga
cttgaggtgctgaacaccattgagaagtgctacatcattttgctgggggtggaggaagct
gagagaatgaaggctagcgtttcggatgaggaggagaggcagagaaggctaaagaccatt
cagagaggagtggagcagatcagcagccagctatgcaaccccaactctttggagtctgca
gaagagtttctaccatgcctcttggtttcaaaagggaaaaaactgctggcaaggctcctc
ccatttctatcccatgatgcgtcactgcaggttctgagagctatcacaacacacctgccg
gtgctgatgagccgagatgtagatgaggctcttcctgtcctctacccatctctccgagct
gtgataggcacattgacattctcccagctggtcagcattctccaggacttcaccacacct
ttacctgactccaaagactcgcgcttaacgctggcctgccaaaataagtttggtctgtcg
ttgctgtacgtgttactttcccaaggtgagagactcctgacctccgacgttcccatggag
ccaagcattggcgatttcgagacctggacggacacggttttccatgtggcgcggcagctg
tcccgctcgtccctcatcgaaccgctctgcttgccctccaatctgctcacactgttctgt
cgctatttggacaaacgcactgtccagcagctcaagaacaacatggagtcttcaactggc
tatctggctgtaggttcctga

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