Porphyrobacter sp. HT-58-2: CHX26_01880
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Entry
CHX26_01880 CDS
T05364
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K24073
RNA polymerase sigma factor CnrH
Organism
phz
Porphyrobacter sp. HT-58-2
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phz03021
]
CHX26_01880
Transcription machinery [BR:
phz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHX26_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
GerE
DUF134
HTH_10
HTH_23
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AUX70749
UniProt:
A0A2L0GQ45
LinkDB
All DBs
Position
complement(386122..386670)
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AA seq
182 aa
AA seq
DB search
MVALALAGRQDAFRELLARYREPIYRFIRASTGDAQEALDLTQDTFVAAFAALGRFDRSR
PLLTWLRRIALNKCRDWGRRRRLRTMLWRTAQIDAAHDVPDDAIAPDVQAADRTELARVN
AAIVRLPARLRETLILRTVEGLGQAETAEVLGISEKAVETRLYRARSKLSELLANEGGRK
NF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtggtggcactggcacttgccggacggcaggacgcctttcgggagctgctggcccgctac
cgtgagccgatctatcgtttcatccgcgcttcgactggcgatgcacaggaagcgctcgac
cttacacaggacacttttgttgccgcctttgccgcactgggccgctttgaccgttcgcgg
ccactcctgacctggctcaggcggattgcgctgaacaaatgccgcgattgggggcgcaga
cgccggctgcgcacgatgctgtggcgcacagctcagatcgatgcggcccatgacgtgccg
gacgatgctatcgcgccggacgtgcaggcggccgaccgcaccgagctcgcgcgggtcaat
gcagcaatagtgcggctgccggcacggttgcgcgaaaccttgatcctgcgaacggtcgag
ggcctcggtcaggcggagacagccgaggtgcttggaatcagcgaaaaagcggtcgaaacg
cggctatatcgggcgcgtagcaagctcagtgagctgctggcaaacgagggtggccgaaag
aatttctga
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