Porphyrobacter sp. HT-58-2: CHX26_02425
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Entry
CHX26_02425 CDS
T05364
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phz
Porphyrobacter sp. HT-58-2
Pathway
phz03030
DNA replication
phz03430
Mismatch repair
phz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHX26_02425 (dnaQ)
03430 Mismatch repair
CHX26_02425 (dnaQ)
03440 Homologous recombination
CHX26_02425 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phz03032
]
CHX26_02425 (dnaQ)
03400 DNA repair and recombination proteins [BR:
phz03400
]
CHX26_02425 (dnaQ)
Enzymes [BR:
phz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHX26_02425 (dnaQ)
DNA replication proteins [BR:
phz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHX26_02425 (dnaQ)
DNA repair and recombination proteins [BR:
phz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHX26_02425 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AUX68518
UniProt:
A0A2L0GH15
LinkDB
All DBs
Position
494070..494777
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AA seq
235 aa
AA seq
DB search
MREVIFDTETTGLDPKTGDRMVEIGCIEMVGRVETGRTFHAYFNPERDMPPEAERVHGLS
AAFLSTKPRFAETAADLLEFLGDAPLVAHNAGFDFGFLNHELERAGFTTISMERMVDTVA
IARRKHPGAKLSLDALCTRYGIDRSHRVKHGALLDAELLAQVYVELTGGRQIGLGLVPSD
TPVSDNIGSSAANAPWHRPSADKPRREPRPHVASPEELERHTAFIAGIANAIWTR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaggtcattttcgacaccgaaaccaccggactcgatcccaagacaggggaccgg
atggtggaaatcggctgcatcgaaatggtcggtcgggtggaaacgggccgcacttttcac
gcctatttcaaccccgaacgggatatgccgcccgaagctgaacgggtgcatggcctgtct
gccgccttcctctcgaccaagccgcgttttgcggaaactgcggcagacttgctggaattt
ctcggtgatgcgccgctggtggcgcataatgccgggttcgatttcgggttcctcaaccac
gagcttgaacgggccggattcaccaccatcagcatggagcgcatggtcgataccgtcgcc
atcgcgcgcaggaagcaccccggcgcgaagctcagtctggatgcgctttgcacgcgttac
gggatcgaccggagccaccgggtgaagcacggcgcgctgcttgatgccgaactgctggcg
caggtctatgtcgagctgaccggcggacggcagatcgggctggggctcgtccccagcgac
acgcctgtatccgacaatatcggatcaagcgccgccaacgcgccctggcaccggccttcc
gccgacaagccccgacgcgaacctcgcccccatgttgccagcccggaggagctggaacgc
cataccgccttcattgccggcatcgccaacgcgatctggacccgctga
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