Porphyrobacter sp. HT-58-2: CHX26_02730
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Entry
CHX26_02730 CDS
T05364
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
phz
Porphyrobacter sp. HT-58-2
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phz03032
]
CHX26_02730
03036 Chromosome and associated proteins [BR:
phz03036
]
CHX26_02730
03400 DNA repair and recombination proteins [BR:
phz03400
]
CHX26_02730
DNA replication proteins [BR:
phz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CHX26_02730
Chromosome and associated proteins [BR:
phz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CHX26_02730
DNA repair and recombination proteins [BR:
phz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CHX26_02730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
ClpB_D2-small
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AUX70773
LinkDB
All DBs
Position
complement(554698..554976)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELLQELQKDNPELRADEVEQVVDIFFDEIAQRLAEGGRVELRGFGAFSTREREARS
GRNPRTGETVDVPEKRVPYFKAGKEIRERLNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatccgaattgctgcaggaactgcagaaggacaatcccgaactgcgcgctgat
gaagtcgagcaggtcgtggacatttttttcgatgaaatcgcacagcgtctggccgagggg
ggccgggtcgaactgcgtggtttcggggcgttttcaacccgtgagcgcgaggcccgcagc
ggccgcaacccgcgcaccggcgaaacggtggacgtgccggaaaagcgcgtcccctatttc
aaggccggcaaggaaatccgtgaacgtctgaacaagtaa
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