Porphyrobacter sp. HT-58-2: CHX26_07340
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Entry
CHX26_07340 CDS
T05364
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
phz
Porphyrobacter sp. HT-58-2
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phz03016
]
CHX26_07340
Enzymes [BR:
phz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CHX26_07340
Transfer RNA biogenesis [BR:
phz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHX26_07340
Prokaryotic type
CHX26_07340
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Ortholog
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GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AUX69331
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Position
complement(1558269..1559024)
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AA seq
251 aa
AA seq
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MTRFALTLEFDGTPFFGLQRQSHGPSVQQSVEDALHRITGETVTLHSAGRTDAGVHALAM
RCHVDIAKPIDPFRLMEALNAHLRPDPVAVTHCEVVPDDWHARFSCTGRRYLYRIANRRA
PLTLQRNRAWHVPQPLDAEAMHRAAQALVGRHDFTTFRSVHCQAADPVKSLDELRVEKVG
EEVHIHAAARSFLHHQVRSMVGCLKLVGAGTWPESRIAEALAARDRNALGLNAPPHGLYF
VAASYPNDRGD
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtttcgccctcactctcgaattcgacggcacgcccttctttgggctgcaacgc
cagagccacgggccgagcgtgcagcaatcggtcgaggatgcgctgcaccgcatcaccggc
gagactgtcaccctgcactccgccgggcgcaccgatgcgggcgtgcatgcgctggccatg
cgctgccatgtcgatatcgccaagcccatcgatcccttccggctgatggaggcgctgaac
gcgcatcttcgccccgatcccgtcgcggtgacccattgcgaggtggtgccggacgactgg
cacgcgcgcttttcctgcaccggcaggcgctatctctatcgcatcgccaaccgccgcgcg
ccgctgaccttgcagcgcaaccgcgcatggcatgtcccccagccgctcgacgcagaggcg
atgcaccgggccgcgcaggccttggtggggcggcatgacttcaccaccttccgctcggtc
cattgccaggccgccgatccggtgaagtcgctggacgagctgcgggtcgagaaagtgggc
gaggaagtgcacatccacgccgccgcgcgctccttcctccatcaccaagtgcgctcgatg
gtggggtgcttgaagctggtcggcgcaggcacatggccggaaagccgcatagccgaggca
ctggccgcgcgcgaccgcaatgctttggggcttaacgcgcccccccacgggctctacttc
gttgcagcgagctatccgaacgaccgcggagactaa
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