Porphyrobacter sp. HT-58-2: CHX26_09870
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Entry
CHX26_09870 CDS
T05364
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
phz
Porphyrobacter sp. HT-58-2
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHX26_09870 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phz03019
]
CHX26_09870 (rnc)
03009 Ribosome biogenesis [BR:
phz03009
]
CHX26_09870 (rnc)
03036 Chromosome and associated proteins [BR:
phz03036
]
CHX26_09870 (rnc)
Enzymes [BR:
phz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CHX26_09870 (rnc)
Messenger RNA biogenesis [BR:
phz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CHX26_09870 (rnc)
Ribosome biogenesis [BR:
phz03009
]
Eukaryotic type
90S particles
RNase
CHX26_09870 (rnc)
Prokaryotic type
rRNA processing factors
CHX26_09870 (rnc)
Chromosome and associated proteins [BR:
phz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CHX26_09870 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Phage_tail_terminator
DUF6013
Motif
Other DBs
NCBI-ProteinID:
AUX69765
LinkDB
All DBs
Position
complement(2101760..2102446)
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AA seq
228 aa
AA seq
DB search
MTALEPSARAWLEAQGFHVANEAPWLEALTHGSFNGSGPADAADYQRLEFLGDRVLGLSV
AAWLFRAGDAPEGRLSQRLNALVSGATCARIARTIGLPQHIRLGKQARDDGGADSDKILG
DVMEALIGACFIENGFDAAQALIYRLWAKELEGDVGKAKHPKSALQEWAAGNRRAAPLYE
VTDRSGPDHAARFTVRVTVRNVGDATATATSKSEAERLAAKAFLERFG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgctcgaaccttccgcgcgcgcatggctggaggcgcagggctttcatgtcgcc
aatgaggccccgtggctggaggcgctgacccacggcagtttcaatggatcaggcccggcg
gatgcagccgattaccagcggcttgaattcctcggcgacagggtgctgggcctgtcggtg
gcggcctggctgttccgcgccggagacgcgccggaaggcaggctttcccagcgactcaac
gctctcgtcagcggcgcgacctgcgcgcgcattgcccgcacgatcgggctcccgcagcat
atccggctgggcaagcaggcgcgcgacgatggcggggcggatagcgacaagatcctcggc
gatgtgatggaggcgctgatcggtgcctgcttcatcgaaaacggcttcgatgccgcgcag
gcgctgatctatcgcctttgggccaaggaacttgaaggcgacgtcggcaaggccaagcat
cccaagagcgcgttgcaggaatgggccgcaggcaaccgccgcgccgcgccgctgtatgaa
gtcaccgaccgttccggccccgatcacgcggcccgctttactgtgcgggtgaccgtccgc
aatgtcggcgatgcgacagcgactgcgaccagcaaaagcgaagccgagaggctcgcggcc
aaggcctttctggagcggtttgggtga
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