KEGG   Porphyrobacter sp. HT-58-2: CHX26_09870
Entry
CHX26_09870       CDS       T05364                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
phz  Porphyrobacter sp. HT-58-2
Brite
KEGG Orthology (KO) [BR:phz00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CHX26_09870 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phz03019]
    CHX26_09870 (rnc)
   03009 Ribosome biogenesis [BR:phz03009]
    CHX26_09870 (rnc)
   03036 Chromosome and associated proteins [BR:phz03036]
    CHX26_09870 (rnc)
Enzymes [BR:phz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CHX26_09870 (rnc)
Messenger RNA biogenesis [BR:phz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CHX26_09870 (rnc)
Ribosome biogenesis [BR:phz03009]
 Eukaryotic type
  90S particles
   RNase
    CHX26_09870 (rnc)
 Prokaryotic type
  rRNA processing factors
   CHX26_09870 (rnc)
Chromosome and associated proteins [BR:phz03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CHX26_09870 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM Phage_tail_terminator DUF6013
Other DBs
NCBI-ProteinID: AUX69765
LinkDB
Position
complement(2101760..2102446)
AA seq 228 aa
MTALEPSARAWLEAQGFHVANEAPWLEALTHGSFNGSGPADAADYQRLEFLGDRVLGLSV
AAWLFRAGDAPEGRLSQRLNALVSGATCARIARTIGLPQHIRLGKQARDDGGADSDKILG
DVMEALIGACFIENGFDAAQALIYRLWAKELEGDVGKAKHPKSALQEWAAGNRRAAPLYE
VTDRSGPDHAARFTVRVTVRNVGDATATATSKSEAERLAAKAFLERFG
NT seq 687 nt   +upstreamnt  +downstreamnt
gtgaccgcgctcgaaccttccgcgcgcgcatggctggaggcgcagggctttcatgtcgcc
aatgaggccccgtggctggaggcgctgacccacggcagtttcaatggatcaggcccggcg
gatgcagccgattaccagcggcttgaattcctcggcgacagggtgctgggcctgtcggtg
gcggcctggctgttccgcgccggagacgcgccggaaggcaggctttcccagcgactcaac
gctctcgtcagcggcgcgacctgcgcgcgcattgcccgcacgatcgggctcccgcagcat
atccggctgggcaagcaggcgcgcgacgatggcggggcggatagcgacaagatcctcggc
gatgtgatggaggcgctgatcggtgcctgcttcatcgaaaacggcttcgatgccgcgcag
gcgctgatctatcgcctttgggccaaggaacttgaaggcgacgtcggcaaggccaagcat
cccaagagcgcgttgcaggaatgggccgcaggcaaccgccgcgccgcgccgctgtatgaa
gtcaccgaccgttccggccccgatcacgcggcccgctttactgtgcgggtgaccgtccgc
aatgtcggcgatgcgacagcgactgcgaccagcaaaagcgaagccgagaggctcgcggcc
aaggcctttctggagcggtttgggtga

DBGET integrated database retrieval system