Porphyrobacter sp. HT-58-2: CHX26_11730
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Entry
CHX26_11730 CDS
T05364
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phz
Porphyrobacter sp. HT-58-2
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phz03400
]
CHX26_11730
Enzymes [BR:
phz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CHX26_11730
DNA repair and recombination proteins [BR:
phz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CHX26_11730
Prokaryotic type
CHX26_11730
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AUX70067
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All DBs
Position
complement(2495107..2496498)
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AA seq
463 aa
AA seq
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MSSPQIVWLRRDLRLADNPALYHAAKAGPVVAVYVLDDESPKHHAYGGASRWWLHHSLAN
LARSLEAKGSRLILRRGEAVAELTKLAQETGATTIHANCHYEPWWLNAERKLGKSLDLKL
HHGNYLMPPGSITTGTGGQYKIYTPFSRAVRAEFPPRAELPAPEKLEAPAQWPASDDLAA
WNLLPTKPDWAGGMRDFWQVGEDAAHARLAAWEADVDDYDDKRNFPSVDKVSRLSPHLHF
GEISPIQIWHRFKDRRSKGWETFEGELIWRDYSANAILQFPAYATQNYREDFDRFPWRDP
ATDSAAARDLKAWQEGRTGYPIVDAGMRQLWQTGWMHNRVRMITASFLIKHLLIDWREGE
KWFWDTLCDADYASNATNWQWTAGTGVDSNMFSRIMAPLSQSEKFDAARYIRTYVPELKG
LEEPYVHDPEEFGRRPSGYPRKIVPHKAARERALAALKTLKTG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcccctcaaatcgtatggctgcggcgcgatctgcgcctggccgataatcccgcg
ctttatcatgccgccaaggctggccccgtcgtcgccgtctacgtcctcgacgacgagagc
ccgaagcaccacgcctatggcggggcctcgcgctggtggctgcatcactcgctggcgaac
cttgcgcggagcctagaagccaagggcagccgcctgatcctccggcgcggcgaagcggtg
gcagagctcaccaagctggcgcaggaaaccggcgcgacgacaatccacgccaattgccac
tatgaaccctggtggctcaatgccgagcgcaagctgggcaagagcctcgacctgaaactc
caccacggcaactacctgatgccgcccggctcgatcaccaccggcaccggcgggcagtac
aagatctacactccgttctcccgcgcggtgcgggccgaattcccgccacgcgccgaactc
cccgcgcccgagaagctcgaagcccccgcccaatggcctgcttcggacgatctcgccgcg
tggaacctcctccccactaagcccgactgggcaggcgggatgcgcgatttctggcaggtc
ggcgaagacgccgcccatgcccgcctcgccgcatgggaggccgacgtcgacgactatgac
gacaagcggaacttccccagcgtcgacaaggtctcgcgcctctccccgcatctgcacttc
ggcgagatttccccgatccagatctggcaccgcttcaaggacaggcgctcgaaaggctgg
gaaaccttcgagggtgagctgatctggcgcgactactccgccaacgcgatcctgcaattc
cccgcctatgccacccagaactaccgcgaggatttcgaccgtttcccgtggcgcgatccc
gctaccgattccgccgccgcgcgtgacctcaaggcatggcaagagggccgaaccggctac
cccatcgtcgatgccgggatgcgccagctgtggcagaccggctggatgcacaaccgcgtg
cggatgatcaccgccagcttcctcatcaagcacctgctgatcgactggcgcgagggcgag
aagtggttctgggacactttgtgcgatgccgactatgcgtcgaacgcgaccaattggcag
tggaccgcggggacaggggtggacagcaacatgttcagccggatcatggcgccgctcagc
cagtctgagaaattcgacgccgcgcgctatatccgcacctatgtccctgaactcaaaggg
ctggaggaaccctacgtccacgatcccgaggaattcgggcgcaggccatccggctatccg
cgcaagatcgtcccccacaaggccgcgcgcgagcgggcattggcggctttgaagacgctg
aagaccggatag
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