Porphyrobacter sp. HT-58-2: CHX26_14095
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Entry
CHX26_14095 CDS
T05364
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phz
Porphyrobacter sp. HT-58-2
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phz03016
]
CHX26_14095
Enzymes [BR:
phz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CHX26_14095
Transfer RNA biogenesis [BR:
phz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHX26_14095
Prokaryotic type
CHX26_14095
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AUX70475
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All DBs
Position
complement(2984691..2985602)
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AA seq
303 aa
AA seq
DB search
MTTPLSGWLILDKPRGMGSTQGVSAVKRVLRANGYAKTKVGHGGTLDPLAEGVLPIALGE
ATKLAGRMLDSDKIYAFTVKFGAETDTLDTEGPVIATSDARPTLAEVEAILPRFTGAIEQ
VPPAYSALKVGGQRAYDLARAGEAVALKARQVTIHALNLRRGDDLDEVTLEAHVSKGTYI
RSLARDIAHALGTCGHVTYLRRIKAGPFLESQAISLDKLEQTAKGRGLEHLLLPLEAGLD
DIPALTLDQTSAQAVRQGRVLSGMPQSSGLYLAKLGSVPVALMEISDGTATVVRGFNLPD
VAE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacccctttccggctggctgattctcgacaagccgcgcggcatgggcagcacg
caaggcgtgagcgcggtcaagcgggtgctgcgcgcaaacggttatgcgaagaccaaggtt
ggccacggcgggacgctcgatccgctggccgaaggcgtgctgccgatcgcgctgggcgag
gcgacgaaacttgccgggcggatgctcgatagcgacaagatttatgcctttacggtaaag
ttcggggcggaaactgacacgctcgataccgaggggccggtgattgccaccagcgatgcg
cgcccgacgctggccgaggttgaagcgatcctgccgcgcttcaccggcgcaatcgagcaa
gtgccgccagcgtactcggcgctcaaggtcggcggccagcgcgcctatgatttggcgcgc
gcgggggaggcggtggcgctgaaggcgcgtcaagtcacgatccacgccctcaacctgcgc
cggggtgacgatctggatgaggtaacgcttgaagcccacgtctccaaaggcacctatatc
cggtccctcgcgcgggacatcgcccacgcgctgggcacctgcgggcatgtcacctatctc
agacgcattaaggccgggccgttcctcgaaagccaagcgatttcgctggacaaactggag
caaaccgctaagggccggggccttgaacacctcctcctgccgctagaggcggggctggac
gacatcccggcccttaccctcgaccagacaagcgcgcaggcggtccgacagggccgggtg
ctgtctggcatgccccaatcatccgggctctaccttgcgaaactgggctctgtcccggtc
gcgctgatggaaatttcggatgggacggccacggtcgtcaggggtttcaaccttcccgat
gtcgctgagtaa
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