Pseudoalteromonas issachenkonii: PI2015_0085
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Entry
PI2015_0085 CDS
T04164
Name
(GenBank) Pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pia
Pseudoalteromonas issachenkonii
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pia03009
]
PI2015_0085
Enzymes [BR:
pia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PI2015_0085
Ribosome biogenesis [BR:
pia03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PI2015_0085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ribosom_S12_S23
RsgI_N
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ALQ53423
LinkDB
All DBs
Position
I:complement(89056..89748)
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AA seq
230 aa
AA seq
DB search
MDTKIRLAKYIAHAGICSRKQASRLIDEGVVIVNNRPANHIDHVDENDRVIVNGHAIKGP
ADLVYFAYHKPVGIDCKLNHHDPSSLIHHLPQLTRVYPIGRLDKDSRGLIILTNDGDFCN
QLIHPDFHQPKRYLVTVNKPLDAHFCEKMAAGVPVDKQITRPCEVVKIASNQFSIVLKQG
LNRQIRKMAHYCGYTVIDLYRVQISELLLDNLNLPENHFIKINKNDILSQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaaaattcgactcgctaaatacattgctcatgccggtatttgctcacgaaaa
caagcgtcgcgcttgattgatgaaggcgttgtcatcgttaataatcgccccgctaatcat
attgatcatgtggacgaaaacgaccgtgttatcgttaatggtcacgccattaaaggccca
gccgatttagtgtactttgcctatcacaaaccggtagggattgactgtaaactcaatcat
cacgaccccagcagccttattcatcacctgcctcaacttacccgtgtttaccctattggc
cgccttgataaagattctcgtggtttaattatcttgaccaacgacggagacttttgtaat
caactgattcatccagactttcatcaacctaaacgctacttagtcactgtgaataaacca
ttagacgcgcatttttgtgaaaaaatggcggcaggcgtccccgttgataagcaaataaca
cgaccttgtgaagtagttaaaatagcgagtaatcaatttagtattgttttaaaacaaggg
ctcaacaggcaaatacgtaaaatggcgcattactgtggctacacagtcattgatttatac
cgcgtacagatcagtgaattactattagataatttaaacctcccagaaaaccactttata
aaaattaacaaaaacgatattttaagccaataa
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