KEGG   Pseudoalteromonas issachenkonii: PI2015_0329
Entry
PI2015_0329       CDS       T04164                                 
Name
(GenBank) Type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pia  Pseudoalteromonas issachenkonii
Brite
KEGG Orthology (KO) [BR:pia00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pia02048]
    PI2015_0329
Enzymes [BR:pia01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PI2015_0329
Prokaryotic defense system [BR:pia02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PI2015_0329
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: ALQ53657
LinkDB
Position
I:complement(367217..370504)
AA seq 1095 aa
MTTVKFQEEFSAKIPALTLLTNLGYTFIPPSECEALRGNTLAIEKKSTHQVILLPVMRAF
LAKQTFSFAGKQHTLSEAAIDKVMHELNPAMNLGLKAANEKIYNALMYGVSVTEFIDGKK
ASPTIKLIDWHNIDNNQFHFTEELVVQNAEGTGNRIPDIVCFVNGLPLVVIEAKRPDSNK
EGKSTNAEAISQHIRNQGQAEIPHLYAFSQLLLAINGHEGLYATCGTIDKFWAKWKEEQI
LEAEFVRLKNHKLSDEQLNKLFNHRPVKAKDDYLSLLAAGDLTVTDQDRLIVSLLRPERL
LDMTRLFTLFDKKAGKIVARYQQVFGIKALIERINTFDDSGAREGGVIWHTTGSGKSFTM
VFLSKALIWLEELAQCRVIIVTDRVDLEDQLSRTFASGGVLTDRDKKDAMATTGKRLAEQ
IGKGNERVIFSIINKFGSAIKYKECYNDSPNIIVLVDEGHRSQNGENNIRMQQTLPKAAY
IAFTGTPLLKDDKTENKFGKIIHSYTMQQAVEDKTVTPLLYEERIPELNVNDKAIDAWFE
RSTSKLTDKQKTDLKKKFSQKGQIYQTEGRIELIAYDIADHFQNFKQQGLKGQLACDSKA
SAIRYKKALDKIGTVTSVVAMSAPDTREGHEAVDQESKDIVQNWWKANVNKMDEKAYTKA
IIEDYGRDDGPDIMIVVDKLLTGFDEPKNTVLYIDKPLKEHNLIQAIARVNRLHSKKQFG
YLIDYRGILKELDTTIEKYQDLAERTQGGFDIDDLKGLYNRMDTEYKKLPGLHIDLWAIF
EGVKNKQDGPALRQALAPKVQDVDGKLVDTNLKKRDDFYSVLTAFSNCMKVALQSATYFE
DKSLDNKRDLYKRDLKAFVDLRKQVREDADETINYDEYAEDIRSLLDKHIAGIEVKEPDG
AYLVGNLGKDVKPQDMSDDEARNQTDKITGRITKMIEQDLADDPYAQEYFSNMLKKAIED
AKAMFDAPVKQYILFADFEQEVKERQIVDMPDEFVDDSGKLNKHAQAYFGLFKHLFDANF
LNEKSLDNDKLVALAFSIDDVVNTAVAEYSINHAEIENAIHMKLLPMLFADLGLDNAQKL
IEEVLKITRLGLARG
NT seq 3288 nt   +upstreamnt  +downstreamnt
atgacaacggttaaatttcaagaagaattcagcgcaaaaatacccgcactgacattgtta
accaacttgggttacacctttattccaccaagtgaatgcgaagcgctacgtggcaacact
cttgcaattgaaaagaaaagcacccatcaagttattttactccctgtaatgcgtgccttc
ttagcgaaacagacgttctcatttgcaggtaagcaacatacactatcagaagctgctatt
gataaagtcatgcatgaactaaaccctgctatgaacttaggtttaaaagcagctaatgag
aaaatctacaatgcgcttatgtatggcgtgagcgttaccgaattcatagatggcaaaaaa
gcctcgcccaccattaaactcattgattggcataatattgataataaccaattccatttt
actgaagagttagtggttcaaaatgccgaaggcactggcaatcgcattcccgatattgtg
tgctttgtgaatggcttaccattagtagtgattgaggcgaaacggccagattcaaataaa
gaaggtaaatcgaccaacgctgaagcgatttctcagcacattcgcaatcaaggtcaggct
gaaattcctcacttgtatgcatttagccaattgctcttagcgataaatgggcatgaaggt
ctgtacgctacctgcggcacaatagataagttttgggcgaagtggaaagaggagcaaata
cttgaagcggaatttgtcaggttaaaaaatcataaacttagcgatgaacaattaaataag
ctgtttaatcatcgccctgtcaaagcgaaagatgactacctttcattgcttgcagcaggc
gacttaactgttaccgaccaagataggcttatagtcagcttactccgccctgagcgcttg
cttgatatgactcgcctgtttaccttgtttgataaaaaagctggaaagattgtcgctcga
tatcaacaagtatttggcataaaagctcttattgaacgaattaacacgtttgatgattca
ggtgctcgtgaaggcggtgttatttggcacaccacaggtagcggtaagtcttttactatg
gtgtttttatccaaagcacttatttggctagaagaattggcgcaatgccgagtgatcata
gtgacagaccgtgtggacttggaagatcaattaagccgtacctttgcatctggcggtgta
ttaactgaccgagataaaaaagatgcaatggcgactacaggtaagcgtttagctgaacaa
atcggtaaagggaatgagcgagttatcttctcgatcattaataagtttggctcagcgatt
aaatacaaagaatgctacaacgacagtcctaatattatcgttttagtggatgaaggccac
cgtagtcagaacggtgaaaataatatccgtatgcagcagacgctgcctaaagcggcctat
attgcttttacaggtacgccactgttaaaagacgataagaccgaaaacaaattcggtaag
atcattcactcttacaccatgcagcaagcggttgaagataaaactgttacccctctgtta
tacgaagaacgcattccagagctgaacgttaacgataaagctattgatgcatggtttgaa
cgcagtaccagtaaattaactgataagcaaaaaacggatttaaagaagaagttttctcaa
aaaggtcagatctaccaaaccgaaggtcgcattgaattaatcgcatacgatattgcggac
cacttccagaactttaaacagcagggcttaaaaggtcagctagcttgtgattccaaagcc
tctgcaattcgttataagaaggcattggacaaaattggtacggtaacatccgttgtggcg
atgtcggctccagatactcgtgagggtcacgaagctgttgatcaagagagtaaagatatc
gtgcaaaattggtggaaggctaatgttaataaaatggatgaaaaagcctacaccaaagcc
attattgaagactacggcagagatgatggcccagatatcatgatcgttgtagataagctt
ctgacaggctttgacgagccaaagaacactgtactttatatcgataagcctctaaaagag
cataacctaatacaagctatcgcccgtgttaaccgactgcacagtaaaaagcagttcggt
tacttaatcgattaccgaggcattttaaaagagcttgataccaccattgaaaagtatcaa
gaccttgcagaacgtacccaaggcggctttgatattgatgacctaaaaggtttgtataac
cgaatggatacggaatacaaaaagcttccggggctgcacattgatttgtgggcgatattt
gaaggtgttaaaaacaagcaagatggtccagcacttcgccaagcgttagcaccaaaggtg
caagatgtcgatggcaagcttgtcgataccaatcttaaaaagcgtgatgacttttattcg
gtactgaccgcattttcaaactgtatgaaagtagcattgcaatcagcaacctactttgaa
gataagtcattagataacaaacgtgacttgtacaaacgtgacctaaaagcctttgtcgat
ttacgtaaacaagtgcgtgaagatgctgacgaaaccattaattacgatgaatatgctgaa
gatattcgcagccttctagacaagcacattgctggtattgaagtaaaagagcctgatggt
gcctatttagttggtaacttaggaaaagacgttaagccacaggatatgagcgatgacgaa
gctcgtaaccaaacggacaaaattacaggccgaatcactaagatgatcgagcaagactta
gctgatgatccttatgctcaagaatatttctctaatatgcttaaaaaggcgattgaagat
gccaaagcaatgtttgatgcgcctgttaagcaatacatcctcttcgcggattttgaacag
gaagtaaaagagcgacagattgtagatatgcctgatgagtttgtggatgactcaggcaag
ttgaataaacatgcccaagcttactttggcttattcaagcacctatttgatgctaacttc
ttaaatgaaaaatcattggacaatgataagttggttgccttggcatttagtattgatgat
gtagtcaatacggctgttgctgagtattccattaatcatgcggaaattgaaaatgcaatc
cacatgaagttattacctatgttatttgctgatcttggccttgataacgctcaaaagttg
attgaagaagtgctcaagatcactcgactaggcttagcaaggggctaa

DBGET integrated database retrieval system