Pseudoalteromonas issachenkonii: PI2015_2031
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Entry
PI2015_2031 CDS
T04164
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pia
Pseudoalteromonas issachenkonii
Pathway
pia03030
DNA replication
pia03430
Mismatch repair
pia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PI2015_2031
03430 Mismatch repair
PI2015_2031
03440 Homologous recombination
PI2015_2031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pia03032
]
PI2015_2031
03400 DNA repair and recombination proteins [BR:
pia03400
]
PI2015_2031
Enzymes [BR:
pia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PI2015_2031
DNA replication proteins [BR:
pia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PI2015_2031
DNA repair and recombination proteins [BR:
pia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PI2015_2031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALQ55316
LinkDB
All DBs
Position
I:complement(2274011..2277502)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAPEFVHLRVHSDFSMVDGLAKTKPIVAKAQELEMPALAITDQMNFCGLVRFYGAAHNA
GIKPIVGADFWVRSPEFPDEPSRLTLLAKDNIGYKNITLLISKAYQRGHVFHRPVIDREW
LVDLKEGLIILSGAKDGDLGKALIKGNPAIVESVVSFYKQHFSDHYYIELIRTNRAQEEN
YLHMAVELATNEQLPVVATNEVVFLKPENFEAHEIRVAIFDGYTLDDKRRPKRFSQEQYL
KTPEQMAELFSDIPEALQNTVEIAKRCNVTVQLGEYFLPDYPTGSLKIDEFLVKVSQDGL
EERLQFLFPDEQERQEKRGEYDERLKIELDVINQMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSA
LYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPGDPGMTLAKAFDVEPR
LQEAYDGDEEVKDLIDMCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDDEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWALDMTNERLKREGKQPVDINTIPLDDKKSIELL
LRAETTAVFQLESRGMKDLVRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKLGREE
ISYPDAQYQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSTFEEGARNNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHYPA
EFMAAVMSADMDNTDKIVTLVDECENMKLTLLPPDVNAGEYKFTVNLQGEIVYGIGAIKG
VGEAPVDAILEARAKGGPFKDLFDFCARVDLKRLNKRVTEKLIYAGALDQLGPEKTQPGR
ATLLASLKDAMRAADQHNKAELLGQSDLFGLLATEPDEVEQAFIKATPLTDNQWLDGEKD
TLGLYLTGHPINQYRRELGHYTSGRLIDLQPTNRDVLSTGAGLVIAARTLINKKGNRWGL
ITLDDKSARIDVRLFPEQFEMYQDMLQINNILVISGQVSFDNFSGGITMTAREINTIAQA
REKRIKAIKMTLNMVQIEAGFFDKLQKVLEPYKMGTCPIKVYYQRPDALVQLTLGIEWCV
TPSDDLIHKLSLMAAQNVELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctgaatttgttcatctaagagttcactcagacttttcaatggttgatggt
ttggcaaaaaccaaaccaatcgtcgctaaagcacaagagcttgaaatgccagcgttggca
attaccgatcaaatgaacttttgtggtctggtgcgtttttatggcgcagcgcataatgcg
ggtattaagccgattgttggtgcggatttttgggtacgtagcccagaattccccgacgaa
ccaagccgattaacattattagccaaagataacattggctataaaaatattactttattg
atctctaaagcctatcaacgtggccatgtttttcatcgccctgtcattgaccgtgagtgg
ttagttgatttaaaagaggggcttatcatactctcgggcgccaaagatggcgatttagga
aaagccttaataaaaggtaaccccgctattgttgagtcggtggtcagtttttataaacag
cattttagcgatcattattatatagagcttattcgtaccaaccgtgctcaagaagaaaat
tatttgcacatggcggtggagcttgcaacaaatgagcaattgccagtagtggccaccaat
gaagtggtatttttaaaacctgaaaactttgaagcccatgaaattcgtgtggctattttt
gatggttacactctagatgataaacgccgaccaaagcgtttttcacaagagcaataccta
aaaacgccagaacaaatggcagagctatttagtgatattccagaagcgctacaaaatacc
gtagaaattgcaaagcgctgtaatgtaaccgtgcaattaggtgagtatttcctaccagat
tacccgacgggctcactaaaaattgatgagtttttggttaaagtgtcacaagacggcctt
gaagaacgattacagtttttatttcctgacgagcaagaacgtcaagaaaaacgtggcgaa
tacgatgaacgtttaaaaatagaacttgatgtaattaaccaaatgggattccctggttac
ttcttgatcgtaatggagtttattcagtggagtaaagataacaatattccagtaggccca
gggcgtggttcaggtgcgggttcattagtggcttatgcccttaaaattaccgaccttgat
ccactagagttcgatttactcttcgagcgattcttaaaccctgaacgtgtttctatgccc
gactttgacgtcgacttttgcatggataggcgtgatgaagtaattgatcatgtatcggcc
ttgtatggccgtgacgcggtatcgcaaattattacctttggtactatggcagcaaaagcg
gtaatacgcgatgtaggccgggtacttggtcatccgtatgggtttgtcgatcgtatttct
aagcttattccgggcgaccctgggatgacactggctaaagcatttgacgtagaaccccgt
ttgcaagaagcctacgacggcgatgaagaagttaaagacttaatcgacatgtgtcgtatt
cttgagggttgtacccgtaatgccggtaaacacgcagggggggttgtaatatcgccgacc
accattaccgattttgcggcgctctattgcgatgacgaaggcaagtttccagttactcag
tttgataaaaacgatgtagaaaccgcgggtttagttaagtttgactttttaggcttacgg
acgctcaccatattacagtgggcgctggatatgaccaatgagcgcttaaagcgtgaaggc
aaacagccggtcgatatcaacaccattccattggatgataaaaaaagtatagagttactg
ctgcgcgctgaaaccaccgcggtattccagctagaatcacgcggcatgaaagacctagtt
cgccgattaaagcccgattgctttgaagatatgatagccctagtggccttattccgccca
ggtccactgcaatcaggcatggtagataacttcatcgaccgaaaactcggcagagaagaa
atctcatatcccgatgcgcaataccaacacgaaagtttaaagccgattcttgagccgaca
tacggcattattttgtatcaagaacaagttatgcaaatagcgcaggtactggccggttat
acactgggcggcgccgacatgttacgtcgtgctatgggtaagaaaaagcctgaagaaatg
gcaaaacagcgctcaacctttgaagaaggcgcacgtaacaacggtattgacggcgaactg
gcaataaaaatatttgacttggttgaaaagtttgcgggttacggttttaacaaatctcac
tcagcagcttatgcattagtatcgtatcaaacgctgtggatgaaaacgcattatccggcc
gagtttatggcggcggtaatgtcggctgatatggataacaccgacaaaatagtaacgctg
gtggatgaatgtgaaaacatgaaactcaccttgttaccgcccgatgtaaacgcgggtgaa
tacaagtttactgttaaccttcaaggtgaaattgtctatggcataggggcaattaaaggt
gtgggtgaagcgccggttgatgccatattagaggcgcgagcaaaaggcggcccatttaaa
gacctatttgatttttgtgcgcgtgttgatttaaaacgcttaaataaacgcgttaccgag
aaattaatttatgcaggcgcattagaccaactagggcctgaaaaaactcaacctgggcga
gcaacactattagccagcttaaaagatgcgatgcgcgcagccgatcagcacaacaaagct
gaattattagggcaaagtgatttatttggtttacttgctacagagcctgatgaagtagag
caagcgtttataaaagcgacaccgcttacggataatcagtggcttgatggcgaaaaagac
accctaggcctttatttaaccggacatcctataaaccagtatcgacgagagcttgggcat
tatactagtggtcgactcatcgacttacaaccaactaatcgtgatgtgctctcaaccgga
gcaggtttagtgattgcagcgagaaccttaattaataaaaaaggaaatcgttgggggctg
ataactttagatgacaaaagcgcccgaattgatgtacgcttgtttccagaacagtttgaa
atgtaccaagatatgttgcaaatcaacaatattttggtgatatccggacaggtcagcttt
gataacttctctggtggtattacaatgaccgccagagaaataaacaccattgctcaggcg
cgtgaaaagcgtataaaagcgattaagatgacgctgaatatggtgcagatcgaggctggt
ttcttcgataaattacaaaaagtactcgaaccatacaaaatgggaacgtgtccgatcaag
gtatattatcaacgccccgatgcgttggtgcaattaaccctagggatcgaatggtgtgtt
acgccaagtgacgacttaattcataagttatcgctgatggcagcgcaaaatgtagaacta
gaatttaactaa
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