Pseudoalteromonas issachenkonii: PI2015_2267
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Entry
PI2015_2267 CDS
T04164
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pia
Pseudoalteromonas issachenkonii
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pia03009
]
PI2015_2267
Enzymes [BR:
pia01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PI2015_2267
Ribosome biogenesis [BR:
pia03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PI2015_2267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
Methyltransf_11
PrmA
PCMT
Methyltransf_23
RrnaAD
FtsJ
DOT1
Methyltransf_4
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ALQ55546
LinkDB
All DBs
Position
I:complement(2527526..2528851)
Genome browser
AA seq
441 aa
AA seq
DB search
MAQIFKAKKKPLQQQSLELDITAMDHHGRGIAKYNNKVCFVSGALPGERVKAKLVDDKAR
YSQADTLKILKASEYRTTPICEHYSQCGGCQLQHLDATQQVIEKQAAVNQLFAKFAKLTD
LNWQAPLLSQATHYRRSARIAVMFDKAAKKMRVGYRARGSKSIVSINQCPVLSDVFAEVF
NVFDNIINHNKALHSISHLQLCAADEQHFIVIRHTKAISPTDKAFVEQSVSAHHWQLVWQ
SDSDMIDHAHLAMPFYKLDQLDIKFEFGLNNFIQVNASLNQAMLIQAASWLALQGDENVL
DLFCGIGNFSLVLAKQAKTVTGIEGVTSAVALATQNAHTNSITNTQFHCFDLTTSIKKAP
WFNKELDILVLDPSRTGAMAVLEQLPLTQFKAILYVSCDPVTLARDSAIISQAGFELNKI
GLMNMFPHTGHIETMALFQRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaatatttaaagcaaagaaaaaaccacttcaacagcaatcacttgaacttgat
ataacggcaatggatcaccacggacgtggtattgctaagtacaataataaagtgtgtttt
gtcagtggggcattacctggtgagcgagtaaaagccaagttagttgatgataaagcacgt
tacagccaagctgacacgcttaaaatactcaaagccagtgaatatcgcactacacccatt
tgtgaacattacagtcaatgcggtggttgccagttacagcatttagatgccacacaacaa
gtcattgaaaagcaagcggcggtaaatcaattatttgccaagtttgcaaaattaactgat
ttgaactggcaagctccgctgctaagccaagcaacgcattaccgacgtagtgcccgcatt
gccgtaatgttcgacaaagcagcaaaaaaaatgcgggtaggctatagagcacgtggctct
aaaagtattgttagcattaatcagtgcccagtattaagtgacgtatttgcagaggtattt
aacgtatttgataacataattaatcataataaggcgctgcacagtataagtcatttgcag
ttatgcgctgcagatgagcaacactttattgttattcgtcatacaaaagccatttcgccc
acagataaagcgtttgttgagcaaagtgtctcggcgcatcattggcaattagtgtggcaa
agtgatagcgatatgattgatcatgcccatttagcgatgccattttataagcttgatcag
ttagatataaaatttgaatttggactaaataactttattcaggtcaatgcgagtttaaat
caggcaatgttaattcaagcggcgagctggttagcattacaaggtgatgaaaatgtactg
gatttattttgtggtattggtaacttctctttagtgttagcaaagcaggctaaaacagta
acaggaattgaaggcgttacttcggcggttgcattagcgacgcaaaatgcgcacactaac
tctattacaaatactcaatttcattgttttgatttaaccacgagtattaaaaaagcgccg
tggtttaataaagagttagatattttagtactcgacccctctcgcactggtgctatggca
gttttagagcagcttccattaacgcagtttaaagcgattttatatgtctcttgcgaccct
gttactttagcccgtgacagcgctattatttcgcaagccggctttgaacttaataaaata
gggctaatgaatatgttccctcatacggggcatatcgaaactatggcgttatttcaacgg
aggtaa
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