Pseudoalteromonas issachenkonii: PI2015_2480
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Entry
PI2015_2480 CDS
T04164
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pia
Pseudoalteromonas issachenkonii
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pia03009
]
PI2015_2480
Enzymes [BR:
pia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PI2015_2480
Ribosome biogenesis [BR:
pia03009
]
Prokaryotic type
rRNA helicases
PI2015_2480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_30
AAA_22
PhoH
SNF2-rel_dom
AAA_11
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALQ55754
LinkDB
All DBs
Position
I:2773829..2775055
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AA seq
408 aa
AA seq
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MQFSEFDLDDKLLNAINKMGYETPTSIQQQAIPEALQGRDILASAPTGTGKTAAFLIPAI
QYLMDFPRRDPGFARVLIMTPTRELAYQIHEQCELLAKQTQLKIGVVTGGINYGTHKEIF
ENNNDILIATPGRLMEYLETENFHAENVEMLILDEADRMLDMGFRKEMLRICDEAKNRRQ
CFLFSATLEGDSVELFAERILNDPALLEAESSRKEKAKIHQWVHLADDYRHKLELLVNTL
NGPDVSKAIVFVKTRERLETLIGELTNNGVKAAWLRGEMPQDKRMKAMENFHSGKTRILV
ATDVAARGIDVADISHVINFDMPRTADVYVHRIGRTGRAGKKGIAISLIEAHDIGILYKV
ERYIEQKLKRRVFKGLEPKHKEAKPPVKKRKDPVKMKAKKKAKAKKKK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaatttgatcttgatgataagctactcaatgctattaataaaatgggc
tatgaaacccccactagcattcaacaacaagccattcctgaggcgttgcaaggacgcgac
attttagcgtcggcaccaacaggtacgggtaaaacggcggcatttttaattccggcaatt
caatatttaatggatttcccacgtcgtgatccgggctttgcacgggtattaattatgacc
ccaacgcgcgagcttgcttatcaaattcatgaacaatgtgagttacttgcaaaacaaacc
cagttaaaaattggggtggttaccggcggtataaactacggtacacacaaagaaattttt
gaaaataataatgacattttaatcgccacacctgggcgtttaatggagtatttggaaacc
gagaacttccacgcagaaaacgtagaaatgctcattcttgatgaagccgaccgcatgctc
gacatgggttttcgtaaagaaatgctgcgcatttgtgatgaagctaaaaaccgtcgtcag
tgctttttattctcagccacccttgagggcgatagcgtagaattatttgctgagcgtatt
ttaaacgaccccgcgctacttgaagccgaatcatcacgtaaagaaaaagctaaaattcat
caatgggttcatttagccgacgactaccgccataaactagagctattagttaacacttta
aatggccctgatgttagtaaagcgattgtgtttgtaaaaacccgtgagcgccttgaaacc
ctaattggtgagcttactaataacggcgtaaaagctgcgtggctacgtggtgaaatgcca
caagacaaacgcatgaaagccatggaaaacttccacagtggcaaaacccgtattttagtc
gctaccgatgtggcggcccgcggtattgatgtagctgatataagccacgtaattaatttt
gatatgcctcgcactgcagatgtatacgtacaccgtattggccgtacaggtcgcgcgggt
aaaaaaggtattgcaatttcactcattgaagcgcacgacattggcatactttacaaagta
gaacgttacatagagcaaaagctaaaacgccgtgtatttaaaggattagaaccaaagcat
aaagaagccaagccaccggttaaaaagcgtaaagatccagtaaaaatgaaagcaaagaaa
aaagccaaagctaaaaagaaaaaatag
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