Pseudoalteromonas issachenkonii: PI2015_3201
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Entry
PI2015_3201 CDS
T04164
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pia
Pseudoalteromonas issachenkonii
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pia03000
]
PI2015_3201
Transcription factors [BR:
pia03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PI2015_3201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ALQ56448
LinkDB
All DBs
Position
II:201537..202313
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AA seq
258 aa
AA seq
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MSRLNYHHLYYFWSVARIGNLTQAAKELHLSQSALSTQIKQLEHTINIELFERKGRTLAL
TDMGKRVQMYANDIFTKGEELSSFIHKGVISQTQHLSIGVLNTLSRNFIEEFINPLMSND
EVRFSLTAGRMDGLLNGLAEHELDLVLTNKPIGLEHYDQLWQSQLVSRQPLAIVGPADKK
TRGQFPTGYTDAQWVLPSKTSAIRDSFNALCARWQYQPKIKAEADDMAMLRLLARDSGAL
SVLPSVVVKDEIEQGPIS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttgaactaccatcacttgtattatttttggtctgttgcccgaattggtaac
ttgacccaagccgctaaagagctgcatttatcgcagtcagcactctccactcaaattaaa
cagctagagcacaccattaatattgagttatttgaacgcaaaggacgtactttggcgtta
accgatatgggaaagcgggtgcaaatgtacgccaacgatatattcactaagggcgaagaa
ctgtcgtcttttattcataaaggggtgatttcccaaactcagcatttatcaatcggggtg
cttaatacgctctctcgtaactttatcgaggaatttattaaccctttaatgagtaacgac
gaagtacgcttttcgcttactgcagggcgtatggatgggctgttaaatggcttggcagaa
cacgaactggatttagttttaactaataaacccatcgggcttgagcattacgatcagctt
tggcagagtcagttggtatctcgtcagccattagccatagtgggtccagctgataaaaaa
acacgcggtcaatttcctaccggttacacagatgcacaatgggtgctacccagtaaaacc
tccgcgattagagactcatttaatgctttgtgtgcccgctggcaatatcagccaaaaata
aaagcagaggctgatgatatggctatgctgcgattacttgcccgtgatagtggtgcacta
tcggtattgccctcagtcgtcgtaaaagatgaaatagaacaaggccctattagttga
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