Pseudoalteromonas issachenkonii: PI2015_3299
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Entry
PI2015_3299 CDS
T04164
Name
(GenBank) Putative csg operon transcription regulator (LuxR family) protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
pia
Pseudoalteromonas issachenkonii
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pia03000
]
PI2015_3299
Transcription factors [BR:
pia03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
PI2015_3299
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
HTH_38
HTH_40
Sigma70_r4
HTH_7
HTH_10
HTH_VMAP-M9
CENP-B_N
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ALQ56545
UniProt:
A0ABM6N8R0
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Position
II:311655..312344
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AA seq
229 aa
AA seq
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MLQKSSAFIKTTLQSSFHSQNYTVILRTLQAIFGDIKMDSTIPHIDQRGAYDIFLIDGSQ
NDWQDLIPADLICLAKQYKVVLFNVELEQVCEKNLLLNHFNGVFYKSAAAEDIFKGLVRI
STGELWFTRKVISKAFNDILSVASSFSSLSEDITLNEADYKHLTKREKSVIHLIAQGASN
NKIADKLNISDHTVKTHLYSAFKKTNSRNRVELANWAQRYISVLLPVES
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaaaaagctcggcttttattaagacaacgcttcaatcgtctttccattctcaa
aactacacagttattttaagaacacttcaagccatttttggtgatataaaaatggacagt
actatcccacatattgatcagcgtggtgcttatgacatttttctaattgatggatctcaa
aatgattggcaggacttgatcccagcagatttaatttgtttggctaaacagtataaagtt
gtgctttttaatgtagaactagagcaagtatgtgaaaaaaacttattactcaatcatttt
aatggggtattttataaatcggcagcagcagaagatatatttaaaggcttagtaagaatt
tctactggtgagctttggtttactcgtaaagtaatctctaaggcctttaatgatattcta
agtgtggcctcttcgtttagctccttaagcgaagatatcacgttaaatgaagctgactat
aaacatttaactaaacgagaaaaatcggttattcatttaattgcacaaggagcgagtaat
aataaaatagcggacaaactaaatattagcgaccatactgttaaaactcacctttatagc
gcatttaaaaaaactaattcgcgtaatagagttgaattggccaattgggcgcaaagatat
atttcagtattattacccgttgagagctaa
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