Pseudoalteromonas issachenkonii: PI2015_3595
Help
Entry
PI2015_3595 CDS
T04164
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pia
Pseudoalteromonas issachenkonii
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pia03016
]
PI2015_3595
Enzymes [BR:
pia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PI2015_3595
Transfer RNA biogenesis [BR:
pia03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PI2015_3595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Sp-DndD
Acetyltransf_6
Motif
Other DBs
NCBI-ProteinID:
ALQ56829
LinkDB
All DBs
Position
II:658900..660030
Genome browser
AA seq
376 aa
AA seq
DB search
MHYQLIQTQNELNTFVEQIKNKPILAIDTEFMRRRTLYPEVALIQVYDGEHLALIDPLAE
LSLFDFWQILKDPKVLKVLHSPSEDIEVFQKYAGFVPYPLFDTQFALQLLGEGNCMGFAL
MVKTLLNIEIDKSESRTNWLQRPLTQKQLEYAAADTYHLLPCFELIIDSIKAADLFDIVI
NESELVANKRAFQIPDELLYKEIKNAWQLKPHELAVLKELAVWRRNKAIRKNLALNFVLK
EHNMTEIAKRGPSSLNALRQIPGVEPIEVNRSGVEILKCIEQAKAIPAEQHPQVLKRLID
FPTYKKVAKEIKQKITKVAKEHNIPEDVMASKKQINQLISWNWKLTAQQKEKHIKPDLLS
SWRYDFVKDALKEWDN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgcactaccaattgatccaaacccaaaatgagcttaatacgtttgtagaacaaattaaa
aacaaacccattcttgctattgataccgagtttatgcgccgccgtactttgtatccagaa
gttgcacttattcaagtttatgatggcgaacatttagcgcttattgacccgcttgccgag
ctttccttgtttgatttttggcaaatacttaaagatcctaaagtgctaaaagtactccat
tcaccctcagaagatattgaagtttttcaaaagtacgcaggatttgttccttatccttta
ttcgatacccagtttgcacttcagctattaggtgagggaaactgtatgggctttgcctta
atggtgaaaacattattgaatattgagattgataaaagcgaatcgcgcactaattggtta
caacgcccccttacccaaaagcaacttgaatacgctgctgctgatacgtatcacctgctg
ccttgttttgagttaattatagatagcattaaagccgctgatttatttgatattgtgatc
aatgaaagtgaattagttgccaataaacgtgcttttcaaattccggatgagctactttac
aaagaaattaaaaatgcatggcaacttaagccgcatgaactagcggtacttaaagagtta
gcagtatggcgtcgaaataaagctattcgtaaaaatctagcgcttaattttgtgcttaaa
gagcacaatatgaccgaaattgccaaacgaggcccttcaagtttaaatgctctgagacaa
attcctggggtagaacccattgaagtgaatcgttctggggttgaaattttaaagtgtatt
gagcaggccaaagccattccagctgagcaacacccacaagtattaaagcgattaattgat
tttcctacctataaaaaagtagcgaaggagatcaaacaaaaaattactaaagttgctaaa
gagcataacattccagaagacgttatggcctctaaaaagcaaataaatcagctaattagt
tggaactggaagttaactgctcagcaaaaagaaaaacacataaaaccagatttactcagc
tcatggcgatatgattttgttaaagatgcgctaaaagagtgggataattag
DBGET
integrated database retrieval system
