Paenibacillus ihbetae: BBD41_03630
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Entry
BBD41_03630 CDS
T05154
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
pib
Paenibacillus ihbetae
Pathway
pib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BBD41_03630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pib03400
]
BBD41_03630
DNA repair and recombination proteins [BR:
pib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BBD41_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MSSS
LRIM1_dimer
Motif
Other DBs
NCBI-ProteinID:
ANY71747
UniProt:
A0A1B2DVN4
LinkDB
All DBs
Position
800332..802500
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AA seq
722 aa
AA seq
DB search
MNPSALNKLEYYRIQGELERFAMSYLGIRHIRNMTPLTQLKAIRHRLDETEEARALLNAG
ASVPIPSLEGIELILDLIGTGYVLTERDFGHLIQFLRSCRQLIKYMENKSAIAPTVSSYA
SSMHELKPLLSELERSIHAGRVVDSASKDLAKIRKKILVAEERIKRKLDSLVSRYKGIMQ
EHVISKRGDRYVLPIKKEFRKTLNGSVLDESASGQTVFIEPSELQSLQMELNLLHADEAR
EETKVLSELTSMTEQYEHELRMNADTVGIYDFIIARGKYALSIGGRNVGINQEGLIRLRS
ATHPLIGASMVPLDFAIGDRYKTLIITGPNTGGKTSALKTVGLITLMVQSGLLVPVGEGS
QCAVFDEVAVDIGDGQSLEHALSTFSAHIRNIREILQTAGPSTLILLDEMASGTDPGEGV
GLSIAILEELHKRQSTVVVTTHFTEIKNFAARTPGFENARMEFDTETLEPLYRLRIGEAG
HSYAFVIAAKLGIPEPIIARSREITKAKAVTAHFAEPGETRALPGEFGTYMPNTTDEEAP
IEAHQGTPRETVLGAAQPTATAAVQANTALPMAGEPKKENAATPPAEAVAAESVETTEAV
KAPATETGFPDSGAAPIAAENVEAASPPLFRLGDRVYVPYLKRSGTVYEPKDAKGNVGVL
IQQVKHRINHKRLKPFIAAEDLYPDDYDLDIVFESKENRKKRNLMRRKHIDGLTIETKPD
ET
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttccgcattaaacaaattagagtattaccgaatccagggcgagcttgaacgc
tttgccatgtcgtatctgggtatccggcatatccggaacatgactccgctcacgcaattg
aaagccattcgccacaggcttgatgaaaccgaggaagcccgcgcgctgctgaatgcgggc
gccagcgtacccataccgtcgcttgaagggatcgagctgattctcgacctgatcggtacc
ggatatgtgctgaccgaacgcgatttcgggcatctgatccagttccttcgcagctgccgt
cagctgatcaaatatatggagaacaagagtgctatcgcaccgaccgtcagctcttacgcc
tcctccatgcatgagctgaagccgctgctgtccgagcttgagcgcagcatccatgccggc
cgggtggttgacagcgccagcaaagatttggccaaaattcgcaagaaaatccttgttgcc
gaagaacggataaagcgcaagctcgacagtcttgtcagccgttataaagggatcatgcag
gagcatgtcatcagtaagcgcggcgaccggtatgtcctgccgatcaagaaggagttccgg
aaaacgctgaacgggagcgtgctggatgaatccgcaagcggccaaacggtgtttatcgag
ccttccgagctccaatcgctgcagatggaactgaatctgcttcatgccgatgaagcccgc
gaggagacgaaagtgctgagcgagctgacctcgatgaccgagcagtatgagcacgagctc
agaatgaatgcggataccgtcggcatttatgatttcattatcgccaggggcaaatatgca
ttgtccatcggcggcaggaacgtcggcatcaatcaggaaggcctgatccggctccggagc
gccacgcatccgctgatcggcgcctccatggtaccgctggatttcgcgatcggtgatcgt
tataagacgctcatcattactgggcccaataccggcggaaaaacatcggcgcttaaaact
gtcgggctcattacgctgatggtgcagtcaggactgctcgttcccgtcggagaaggcagc
cagtgcgccgtcttcgacgaggttgccgtagacatcggcgacgggcaaagcctcgagcat
gcgctcagcaccttctctgcccatattcgcaacatccgggaaattttgcagaccgcaggc
ccctccacgttgatcttgctggatgaaatggcgtcaggaaccgatcccggagaaggggtc
ggcttgtcaattgccatactggaggaacttcataagcgtcaatcgaccgtagtcgtaacg
acccattttaccgagattaaaaattttgccgcacgcaccccgggatttgaaaatgcccgc
atggaattcgacacggagacgctggagccgctgtatcggctgcgcattggtgaggcaggt
cacagctatgcctttgtcatcgcggctaaactcggaattccggaaccgattatcgcgaga
tcccgtgaaattacgaaagccaaagcggtaacggctcacttcgcggagcctggggagacg
agggcgcttccgggtgagttcggcacgtatatgcctaatacaaccgatgaagaagcaccg
attgaagctcatcaaggtacgccccgggaaacggtgttgggcgcggcgcagccaacggcc
acggcggctgttcaggcgaatacagctctgccgatggccggcgagccaaagaaagaaaat
gctgccacgccgccggcggaagcggtagcagcagagtctgtggaaacaactgaggccgtt
aaagctccggctacggaaacagggttcccggattcaggcgcagcaccgatagccgcggag
aacgtggaagcagcttctcctcccctcttccgtctcggcgaccgggtctatgtgccttat
ttgaaacgaagcggcacggtgtatgagccgaaggatgccaaagggaatgtcggcgtattg
attcagcaggtcaagcatcggatcaaccacaagcggctgaagccgttcattgctgctgaa
gacttgtatccggatgactatgatctcgacatcgtttttgagagcaaagagaaccgcaag
aaacgaaacttgatgagacggaagcatattgacggacttacgatcgaaacaaagccggat
gagacataa
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