Paenibacillus ihbetae: BBD41_05270
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Entry
BBD41_05270 CDS
T05154
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pib
Paenibacillus ihbetae
Pathway
pib03022
Basal transcription factors
pib03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BBD41_05270
09124 Replication and repair
03420 Nucleotide excision repair
BBD41_05270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pib03021
]
BBD41_05270
03400 DNA repair and recombination proteins [BR:
pib03400
]
BBD41_05270
Enzymes [BR:
pib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBD41_05270
Transcription machinery [BR:
pib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BBD41_05270
DNA repair and recombination proteins [BR:
pib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BBD41_05270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANY72049
UniProt:
A0A1B2DWH4
LinkDB
All DBs
Position
complement(1148496..1150316)
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AA seq
606 aa
AA seq
DB search
MTPKPCIVQRDRTVLLETAHPEFEQARRQLSQYADLLKSPSSFHTYRITPLSLWNAAASG
MSAETICSSLQGLARWEVPSQVLAEIRQLVTRYGQLSLLPHPGKEQHLLLRSDSEPLLNE
LRPLRALADIGLVFRSSREAEVPADRRGLLKQELTRLGYPVLDHAGYQDGQHLDIRWRGE
TVQVSVNPGSACIPEASDPRMEENGQGFQLRDYQREAAASIRDAGGAGGSGVIVLPCGAG
KTVIGMAAMRELQCETLILTSNTTSVRQWVDELLKKTTLTPEDIGEYSGHRKEVRPVTVA
TYQILTHRRGKGDEQLHMKLFNERRWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATL
IREDGREHDVFSLIGPKRYEMPWKELEDQGWIAEVDCLEVKVPMPSHLRAEYRAAGKREQ
YRLAAENPVKLPTLIRLIERHPGAQILVIGQYLDQLKAIADRLQAPLITGRMAQNERHAW
YAAFRSGETRLLVVSKVANFAVDLPDASVAIEVSGSYGSRQEEAQRLGRLLRPKQGENKA
HFYTLVTEDSREELFALRRRMFLIEQGYEYHAMTVMEEAAPAPADAKRASGRNERKPAGK
REASST
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgaagccatgcatcgtccaaagggatcggaccgttctgcttgagaccgcacac
cccgaattcgagcaggcccgccggcagctgtcgcagtatgccgatctgctcaaaagtcct
tcgtcgtttcatacatatcgcatcaccccgttatcgctctggaatgccgccgcaagcggg
atgagcgccgaaacgatctgctccagcctgcaagggctggccagatgggaggttccgtcg
caggttctggcggaaatccgccagcttgtcacccgttacgggcagctgtctctgctcccg
catccgggcaaggagcagcatctgcttctgcgcagcgacagcgagccgctgctgaacgag
ctgcgcccacttcgcgcgctggcggacatcgggctcgtcttccgttcatccagggaagcg
gaggtcccggcggaccggcgcggcttattgaagcaggagctgacgcgcctgggctatccg
gtactggaccatgcgggataccaggacgggcagcatttggatatccggtggcggggagaa
accgttcaggtgtccgtaaatccaggcagcgcatgtattccggaagcttctgatccccgc
atggaggagaacgggcagggctttcagcttcgcgattaccagcgcgaggcggccgcatcc
attcgggatgccggaggcgcagggggcagcggcgtgatcgtgctgccgtgcggggcgggg
aagacggtaatcggcatggcggcaatgcgcgagctgcagtgcgagacgctgatccttact
tccaatacgacctcggtcagacagtgggtcgatgagctattaaagaaaacgacgctgacc
ccggaggacatcggcgaatattccggacatcgcaaagaagtccggccggtcaccgtcgct
acgtatcagatattgacgcaccggcggggcaagggagacgagcagcttcatatgaagctg
ttcaacgaacgccgctgggggctgatcatatacgatgaggttcatctgctgcccgccccg
gtatttcgcgccaccgccgatatccaggcgacgaggcgtctggggctgacggccacgctg
atccgcgaggatggacgggagcatgacgttttttcactgatcggtccgaagcggtatgag
atgccgtggaaggagctcgaggatcaggggtggatcgccgaggtggactgcctggaggtt
aaggttccgatgccttcgcatctgagagccgaataccgggctgccggaaagcgggagcag
tatcggctcgcggccgagaatccggtcaagctgccaacgctgatccggcttatcgagcgc
catccgggggcacagattctcgttatcggccagtacctggatcagctgaaggccattgcc
gatcggctgcaggccccgctcattaccgggcggatggcgcagaatgaacggcatgcatgg
tatgccgcttttcgcagcggggagacccggctgctggtcgtctcgaaggttgccaatttt
gcggtggatctgccggatgcgtcggtcgctatcgaggtttccggcagctacggctcgcgt
caggaagaagcccagcgtttggggaggctgctgcggcccaagcaaggtgagaacaaggcg
catttctatacgctcgtaaccgaggacagccgcgaggaattatttgcgctgcgccgccgc
atgttcttgattgagcaggggtacgagtatcatgcgatgaccgtcatggaggaggcggca
cccgcccctgcggatgcgaagcgggcttcgggccgcaacgagcggaagccggcgggcaaa
agggaggcatcaagcacatga
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