Paenibacillus ihbetae: BBD41_06035
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Entry
BBD41_06035 CDS
T05154
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pib
Paenibacillus ihbetae
Pathway
pib02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BBD41_06035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pib03021
]
BBD41_06035
Transcription machinery [BR:
pib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBD41_06035
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
ANY72184
UniProt:
A0A1B2DWS7
LinkDB
All DBs
Position
complement(1315772..1316902)
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AA seq
376 aa
AA seq
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MANDQHTELETEFTLDQVKDQLIEQGKKRSVLSYKDIMEKLSPFDQDTEQMEEFYEQLAD
LGIDVVNESDDEVSHRASDDHESHDNEDFGFDDDLSLPPGIKINDPVRMYLKEIGRVPLL
SADDEIELANRIEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAV
EKFDYKKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGR
EPSPEEIAAEMELSVEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQEALAPADAAA
YELLKEQLEDVLDTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALR
KLRHPSRSKRLKDFLE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgatcagcatactgaactagaaacggaatttacgctggatcaagtcaaagat
caattgattgagcagggtaaaaagagatccgtattaagctataaagatattatggagaaa
ctgtcgccattcgatcaggatacggagcaaatggaggagttctacgagcagcttgccgac
ctcggcatcgatgtggtgaacgaaagcgacgatgaggtcagccaccgggcatcggatgat
catgaatcccatgacaatgaggatttcggcttcgatgacgatttgtcgctgccgccgggc
atcaagatcaacgatccggtgagaatgtacttgaaagaaatcggacgtgtaccgctcttg
tccgcggatgacgagattgagcttgcgaaccggatcgagcagggggatgaggaggccaag
cgccgcctggccgaggcgaacctgcggctggttgtcagcatcgcgaagcggtacgtcggt
cgcggcatgctgttcttggatctgatccaggaaggcaacatgggtctcattaaagcggtg
gagaagttcgattacaagaaaggctttaaattcagtacgtacgccacatggtggatccgg
caggccattacgcgcgcgattgccgaccaggcccgtacgatccggattccggtgcatatg
gttgagacgatcaataagctgatccgggtatccaggcagctgctgcaggaactgggtcgc
gagccatcgccggaagagatcgcggcagagatggagcttagcgtggagaaggttcgggaa
attatgaagatcgcccaggaaccggtgtccttggaaacgccgatcggcgaagaggacgat
tcccatctcggcgactttatcgaggatcaggaggcactcgctccagccgatgcggcagca
tacgagcttcttaaggaacagcttgaagacgtgctcgatacgctgacggagcgggaagag
aacgtgcttcgtctacggttcggtcttgacgacgggcgcacaagaacgcttgaagaagta
ggcaaggtgttcggcgttacgcgtgaacggatccggcagatcgaggccaaggcgcttcgg
aagcttcgtcatccgagccgcagcaagcggctgaaggattttctcgaatag
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