Paenibacillus ihbetae: BBD41_06260
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Entry
BBD41_06260 CDS
T05154
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pib
Paenibacillus ihbetae
Pathway
pib03030
DNA replication
pib03430
Mismatch repair
pib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBD41_06260
03430 Mismatch repair
BBD41_06260
03440 Homologous recombination
BBD41_06260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pib03032
]
BBD41_06260
03400 DNA repair and recombination proteins [BR:
pib03400
]
BBD41_06260
Enzymes [BR:
pib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBD41_06260
DNA replication proteins [BR:
pib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBD41_06260
DNA repair and recombination proteins [BR:
pib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBD41_06260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delta2
Sigma70_r4_2
SPL
Motif
Other DBs
NCBI-ProteinID:
ANY72226
UniProt:
A0A1B2DWX6
LinkDB
All DBs
Position
complement(1371189..1372208)
Genome browser
AA seq
339 aa
AA seq
DB search
MDAKAAAKAVKQGDVSSVYLLYGSEKFQMREFAEFLETQLIPKEDRDFAIVHMDLGETPI
QAVVEEAETVPFMVQKKLVFVRDTTFFTAAKDNGKVEHKPEALLEYLNNPADYSVIVFMV
GAEKLDERKKVVKAVKKAGVPLSFTPLGGEDLLRWVDKQARNRGCSLREGAAEAIVRNAG
TSLQTLAGEIEKLCLYAGDGGTIDTSTVDMLVARSTEQNVFALVEDIANLRLDKALGIYY
ELLKQREEPIKIAALITRQFRIILQVKTLSAQSYSQQQIASQLGLHPYAVKIAGEQARKF
ESARLEGILNHLANLDYQMKTGAVDKVLGIELFLLRLGA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaagcggcggccaaggcggtcaagcagggggatgtgtcttccgtatatttg
ctgtacggcagcgaaaagtttcagatgagggagtttgccgaatttctggagacccagctg
attcccaaggaagatcgcgactttgccatcgtccatatggatttgggggagactccgatt
caggccgtggtcgaagaagcggagaccgttccttttatggttcagaaaaagcttgttttc
gtacgagatacaacgttctttactgcagccaaggataacgggaaggtggagcacaaaccg
gaggccttgcttgaatacttgaacaatccggccgattacagcgtcattgtgtttatggtg
ggggccgaaaagctcgatgaacgcaaaaaggtggtcaaagcggtaaaaaaagcaggagtc
ccgctttcctttacgccgcttggcggcgaggatctgctgcgctgggtggacaagcaggca
cgtaatagagggtgctcgctgcgcgagggagcggctgaggctatcgtccgcaatgccggg
acaagtcttcagacattggccggcgagatcgagaagctgtgcctgtatgcaggcgatggc
gggacgatcgatacttcgacggtcgatatgctggtagcccgcagcacggagcagaatgtc
tttgccctggtggaggatattgcaaacctgaggctggataaggcgctcggcatctactat
gagctgctgaagcagcgggaagagccgatcaaaatcgccgcgctgatcaccaggcagttc
cggattattttgcaggtgaagaccttgtcggcgcagagctattcgcagcagcagatcgct
tcccagcttgggctgcatccctatgcggtgaaaatcgcgggagagcaggcgcgtaaattc
gaatcggcccggctcgaaggcattttgaaccatctggcgaatctggattatcagatgaag
accggagcggtggacaaggtgctcgggatcgagctgtttttgctgagactgggcgcttga
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