Paenibacillus ihbetae: BBD41_06925
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Entry
BBD41_06925 CDS
T05154
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pib
Paenibacillus ihbetae
Pathway
pib03420
Nucleotide excision repair
pib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBD41_06925
03430 Mismatch repair
BBD41_06925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pib03400
]
BBD41_06925
Enzymes [BR:
pib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBD41_06925
DNA repair and recombination proteins [BR:
pib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBD41_06925
MMR (mismatch excision repair)
Other MMR factors
BBD41_06925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
SLFN-g3_helicase
PhoH
AAA_16
DEAD
Viral_helicase1
nSTAND3
ResIII
Mg_chelatase
NACHT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ANY72345
UniProt:
A0A1B2DXB2
LinkDB
All DBs
Position
complement(1535433..1537604)
Genome browser
AA seq
723 aa
AA seq
DB search
MSQSFQSAYQEEESRLREVIVEIDRQLERLRSIPVYTGHDFTEQVLEAGREEKRQALAKS
LPEPYFGRLDFQENGTGEKKPLYIGKVGFDKEEAGDHPMVIDWRAPVASLFYSFTGGTEP
ASFEAPEGLIEGLVYLKRNVVIRKQILERVSDTYNRESGGPAVNDEFLVYRLGENKDNRL
RDIVSTIQAEQDKIIRAAKNTALIIQGVAGSGKTTVALHRLAYLLYQYKEQVHAEKMIIF
APNLMFLDYISDVLPELGVGDIQQRTFGDWAAELLGIELFSGDHAQTLHRWFEIEPGRGT
PDINDEVSGRYKGSLRLMGLIRRFVERMEENALPDEDFIPWDGAVLKREAIAEWFEQEYK
PYPLAKRKERLLARLHRWIEMELKKSPSGAVMKERKKKAAQREKAYANRWPKFEPLALYK
QLFGASKAAGAWVEELAGEIPADVLKATRKDLKQNIVREEDLPALLYFHCLLHDITGEQR
FDHIVIDEAQDFSPFQVAVLDLFVRGHSFTILGDLSQGIHAYRGVHAWEEMSSLFKEEET
AYFALTRSYRSTMEIIEFANGILEKGVGSELLAVPVFRSGDAVRLIPYGSGSSRTKDLKR
AMESLIAKDYRTVAILTRTLREAEELHVELRAAWPELNLIDGSEGTYQGGYSVLPVYLSK
GLEFDAVIVADADAGHYAEKAWDAKLMYVGCTRALHELWLLHGEARPSYVTAEASDITAI
GWP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacaatcttttcaaagtgcctatcaagaagaggagtcaaggcttcgcgaggtgatc
gtcgagatcgaccggcagcttgaacggctgcgcagcatcccggtgtataccggacatgat
tttacggagcaggtgctcgaggccgggagggaagagaagcggcaggcgctggccaagagt
ctgcccgagccatacttcgggaggctggattttcaggagaacggaaccggagagaagaaa
ccgctgtatatcgggaaggtaggcttcgataaggaagaggctggggatcatccgatggtg
atcgattggcgcgcacctgtcgcaagcctgttttattcgtttacgggcggcacggagcct
gcatccttcgaggcgccggagggtttgattgaagggctggtatatctcaagcgcaatgtc
gtcatccggaaacagattttggagcgggtatcggatacgtataatcgcgagagcggcggt
ccggccgtgaacgacgagtttctggtctaccgccttggagagaacaaggacaaccgcctg
cgggatatcgtctcgacgattcaggccgagcaggacaagattattcgggcggcgaaaaac
acggcgctgatcatccaaggggttgcagggagcggaaaaaccacggtagcgcttcaccgg
cttgcttatttgctgtatcagtacaaggagcaggtccatgccgaaaagatgattattttt
gcaccgaacctgatgtttctggactacatatccgacgtgctgccggagctgggggttggc
gatatccagcagcgaaccttcggcgactgggcagcggagctgcttggaatcgagctgttc
tcgggtgatcatgcgcagacgcttcatcggtggttcgaaattgagccggggcgcgggacg
ccggatattaacgatgaggtcagcggccgctacaagggctcattgcgccttatggggctg
atccgccgctttgtcgagcggatggaggagaatgcgcttccggatgaggatttcatccct
tgggacggggccgtcctgaaacgggaggcgatcgccgagtggttcgagcaggagtataag
ccctatccgcttgccaagcggaaggaacggctgcttgcccggctgcatcgctggatcgaa
atggagctgaagaaatcgccatccggggcggtgatgaaggaacggaagaagaaagcggcc
cagcgggaaaaagcgtacgcaaaccgatggccgaaattcgagccgctcgccctgtataaa
cagctgttcggggcatcgaaggcagctggggcatgggtcgaggagctggccggagaaatt
ccggccgatgtgctcaaggcaacgcggaaggatctgaagcagaatatcgttcgggaagag
gatctgccggcgctgttgtatttccactgcctgcttcatgatataacgggcgaacagcgg
ttcgaccatatcgtcatcgacgaggcgcaggatttctccccgtttcaggtggccgtactg
gatctgttcgtcaggggacattccttcacgatcctcggcgatctgtcccagggcattcat
gcctatcgcggcgtccatgcctgggaggaaatgagctctttattcaaggaagaggagacc
gcttattttgccctgacgcgcagctaccggtcgacgatggagattattgaatttgcgaac
ggtattttggaaaagggtgtcggcagcgagctgcttgcggttccggtattccggagcggg
gatgcggtgcgcctgatcccatacggttccggcagctcaaggacgaaggacctaaagcgg
gcgatggagtctctgatcgcgaaggattatcgtacggtcgcgattctgacgcggacgctg
cgcgaggcggaagagcttcacgtagagctgcgtgcggcatggccggagctgaacctgatc
gacggcagcgaaggtacgtatcagggcggatactcggtgctgccggtctatttgtccaaa
ggccttgaattcgatgcagtcatcgttgcggatgcagatgcgggacattacgcggaaaaa
gcttgggatgccaagctgatgtacgtcggctgtacccgggcattgcatgagctgtggctg
ctgcacggggaagcgcgtccttcttacgtgacggcggaagcctcggatattacggccatc
ggctggccgtga
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integrated database retrieval system
