Paenibacillus ihbetae: BBD41_16785
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Entry
BBD41_16785 CDS
T05154
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pib
Paenibacillus ihbetae
Pathway
pib03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBD41_16785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pib03400
]
BBD41_16785
DNA repair and recombination proteins [BR:
pib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBD41_16785
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBD41_16785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_30
AAA_19
AAA_25
AAA_7
AAA_22
AAA_16
Mal_decarbox_Al
AAA_5
HEM4
Motif
Other DBs
NCBI-ProteinID:
ANY74105
UniProt:
A0A1B2E2A6
LinkDB
All DBs
Position
3832610..3834601
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AA seq
663 aa
AA seq
DB search
MSDLVVSTKSFEIESEFQPQGDQPAAIEQLVEGLRQGKKHQTLLGATGTGKTFTIAQTIA
RVNRPTLVIAHNKTLAAQLASEFKEFFPNNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPKEYGELLLSLRVGMEKPRNQILA
RLVDIQYQRNDINFVRGTFRVRGDVIEIFPASKGEHAVRVELFGDEIERITEIDVLTGEL
VGEREHIAIFPASHFVTREETMRVALINIERELEERLEQLRSEGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFREPGATPYTLLDYFPDDMLIVIDESHVTLPQIRAMYNGD
RARKTVLVEHGFRLPSALDNRPLKFEEFEEKVNQIIYVSATPGPYELEHCDTMVEQIIRP
TGLLDPIIDVRPTEGQIDDLIGEIRERVDRDERVLITTLTKKMAEDLTDYLKEIGIKVRY
MHSDIKTLERMQILRDLRLGTFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRSDRSL
IQTIGRAARNSDGKVIMYGDKITDSMDRAIKETERRRSIQVAYNEKHGITPQTIRKKVRD
VIEATKVAEGKADYLAGDKQKMSKKERQSLIQRLEAEMKDAAKNLQFERAAELRDALLEL
QAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagttgtcagtaccaaatcctttgagattgagtccgagttccagccgcaa
ggcgaccagccggctgcgatcgagcagttggttgaagggctgcgccaggggaagaagcac
cagacgctgctgggcgcaacaggaaccggcaagacgtttacgatcgcgcagaccatcgcc
agagtaaaccggccgacccttgtcattgcgcataacaagacgcttgccgcacagctggcg
agcgaattcaaggagtttttcccgaacaactcggttgattactttgtcagctactacgat
tactatcagccggaagcgtacatcccttcttccgatacgtatatcgagaaggattccagc
atcaacgaagagatcgataagcttcgccactcggccaccagctcgctgttcgagcggcgg
gacgtcatcatcgttgcgagcgtatcctgcatttacggcttgggatcgccgaaggagtac
ggggaattgctgctctcgctccgggtaggcatggagaagccgcgcaatcagattctggcg
cggcttgttgatattcagtaccagcgcaacgacatcaatttcgtccgcggcacgttccgc
gtccgcggagacgtcatcgagattttcccggcctcgaagggcgagcatgcggttcgcgtc
gagctgttcggcgacgagatcgagcggatcacggagattgacgtcctgacgggagagctg
gtcggagagcgcgagcatattgcgatcttcccggcctcccacttcgtaacccgcgaagag
acgatgcgggttgcgctgatcaatatcgagcgggagctggaggagcgccttgagcagctc
cgttccgagggcaagctgctcgaagcgcagcggctggagcagcgtacgcgctatgatatc
gagatgatgaaggaagtcggattctgctccggcatcgagaactattcggggccgctgaca
ttccgggagccgggggcaaccccgtatacgctgctcgattatttcccggacgatatgctg
atcgtgatcgacgagtcgcacgtgacgctgcctcagatccgggctatgtacaacggggac
cgcgccaggaagacagtgctcgtggagcatggattccgtctgccgtcggcgctcgataac
cgtccgctgaagttcgaggagttcgaggagaaggtcaaccagatcatctatgtgtccgca
acgccgggaccttatgagcttgagcactgcgatacgatggtcgagcagatcatccggccg
accgggctgcttgatccgatcattgacgtgaggccgacggaaggacagatcgacgatctg
atcggcgagatccgggagcgggttgaccgtgacgaacgtgtgctgattacgacccttacg
aagaagatggcggaagacttgaccgattatctcaaggagatcggcatcaaggtccgctac
atgcactccgatatcaagacgctggagaggatgcagatcctgcgcgacctgcgcctgggg
acattccacgtgctggtcgggattaacctgctgcgggaaggccttgacctgccggaggtg
tccctcgtagcgattctggacgcggataaggaaggcttcctccgctccgaccggtccctg
atccagacgatcggccgcgccgcccggaactcggacggcaaggtcatcatgtacggagac
aagatcaccgattcgatggatcgggcgattaaggagacggagcgccgccgcagcattcag
gttgcctacaacgagaagcacggcattacgccgcagacgatccgcaagaaggtgcgggac
gtcattgaagcgacgaaggtggccgagggcaaagcggactatttggccggcgacaagcag
aagatgtcgaagaaggagcgtcaaagcctgattcagcgtctggaagccgagatgaaggac
gcggcgaagaatctccagttcgagcgggcggcagagcttcgtgatgcgctgctggagctg
caagccgagtaa
DBGET
integrated database retrieval system
